Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn4bQ7M729 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn4bQ7M729 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.17■□□□□ 0.98
Scn4bQ7M729 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn4bQ7M729 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.17■□□□□ 0.98
Scn4bQ7M729 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn4bQ7M729 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn4bQ7M729 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn4bQ7M729 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn4bQ7M729 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn4bQ7M729 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Scn4bQ7M729 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn4bQ7M729 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn4bQ7M729 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn4bQ7M729 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn4bQ7M729 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn4bQ7M729 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn4bQ7M729 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Scn4bQ7M729 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn4bQ7M729 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Scn4bQ7M729 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Scn4bQ7M729 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scn4bQ7M729 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.14■□□□□ 0.97
Scn4bQ7M729 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn4bQ7M729 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scn4bQ7M729 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn4bQ7M729 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn4bQ7M729 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Scn4bQ7M729 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn4bQ7M729 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Scn4bQ7M729 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn4bQ7M729 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn4bQ7M729 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn4bQ7M729 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Scn4bQ7M729 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn4bQ7M729 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scn4bQ7M729 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Scn4bQ7M729 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn4bQ7M729 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn4bQ7M729 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Scn4bQ7M729 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.1■□□□□ 0.97
Scn4bQ7M729 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.1■□□□□ 0.97
Scn4bQ7M729 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn4bQ7M729 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.1■□□□□ 0.97
Scn4bQ7M729 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn4bQ7M729 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Scn4bQ7M729 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn4bQ7M729 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Scn4bQ7M729 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn4bQ7M729 Gm14523-201ENSMUST00000117260 558 ntBASIC21.09■□□□□ 0.97
Scn4bQ7M729 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.09■□□□□ 0.97
Scn4bQ7M729 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn4bQ7M729 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Scn4bQ7M729 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn4bQ7M729 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn4bQ7M729 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn4bQ7M729 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.08■□□□□ 0.97
Scn4bQ7M729 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn4bQ7M729 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scn4bQ7M729 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.08■□□□□ 0.97
Scn4bQ7M729 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.08■□□□□ 0.97
Scn4bQ7M729 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn4bQ7M729 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn4bQ7M729 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn4bQ7M729 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.07■□□□□ 0.96
Scn4bQ7M729 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.07■□□□□ 0.96
Scn4bQ7M729 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn4bQ7M729 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn4bQ7M729 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn4bQ7M729 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn4bQ7M729 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn4bQ7M729 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.06■□□□□ 0.96
Scn4bQ7M729 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn4bQ7M729 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.06■□□□□ 0.96
Scn4bQ7M729 Gm12366-201ENSMUST00000121722 873 ntBASIC21.06■□□□□ 0.96
Scn4bQ7M729 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.06■□□□□ 0.96
Scn4bQ7M729 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.06■□□□□ 0.96
Scn4bQ7M729 Gm5786-201ENSMUST00000085368 882 ntBASIC21.06■□□□□ 0.96
Scn4bQ7M729 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn4bQ7M729 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Scn4bQ7M729 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn4bQ7M729 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn4bQ7M729 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.05■□□□□ 0.96
Scn4bQ7M729 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.05■□□□□ 0.96
Scn4bQ7M729 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn4bQ7M729 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn4bQ7M729 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn4bQ7M729 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn4bQ7M729 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn4bQ7M729 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms