Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox17Q61473 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.37■□□□□ 0.85
Sox17Q61473 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox17Q61473 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox17Q61473 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox17Q61473 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sox17Q61473 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sox17Q61473 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox17Q61473 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.36■□□□□ 0.85
Sox17Q61473 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox17Q61473 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox17Q61473 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox17Q61473 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox17Q61473 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Sox17Q61473 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox17Q61473 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sox17Q61473 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Sox17Q61473 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox17Q61473 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox17Q61473 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox17Q61473 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox17Q61473 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sox17Q61473 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.34■□□□□ 0.85
Sox17Q61473 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox17Q61473 Notumos-201ENSMUST00000151998 2659 ntBASIC20.34■□□□□ 0.85
Sox17Q61473 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox17Q61473 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox17Q61473 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox17Q61473 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox17Q61473 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.33■□□□□ 0.84
Sox17Q61473 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.33■□□□□ 0.84
Sox17Q61473 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox17Q61473 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.32■□□□□ 0.84
Sox17Q61473 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox17Q61473 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sox17Q61473 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.32■□□□□ 0.84
Sox17Q61473 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox17Q61473 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox17Q61473 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox17Q61473 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox17Q61473 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.31■□□□□ 0.84
Sox17Q61473 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sox17Q61473 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sox17Q61473 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sox17Q61473 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox17Q61473 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox17Q61473 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sox17Q61473 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Sox17Q61473 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sox17Q61473 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sox17Q61473 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sox17Q61473 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox17Q61473 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.3■□□□□ 0.84
Sox17Q61473 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox17Q61473 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.29■□□□□ 0.84
Sox17Q61473 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox17Q61473 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Sox17Q61473 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox17Q61473 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox17Q61473 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sox17Q61473 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sox17Q61473 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sox17Q61473 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox17Q61473 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox17Q61473 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox17Q61473 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Sox17Q61473 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox17Q61473 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox17Q61473 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.27■□□□□ 0.84
Sox17Q61473 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Sox17Q61473 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sox17Q61473 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox17Q61473 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox17Q61473 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.26■□□□□ 0.83
Sox17Q61473 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox17Q61473 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox17Q61473 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.26■□□□□ 0.83
Sox17Q61473 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Sox17Q61473 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox17Q61473 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox17Q61473 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.26■□□□□ 0.83
Sox17Q61473 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.26■□□□□ 0.83
Sox17Q61473 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sox17Q61473 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox17Q61473 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox17Q61473 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox17Q61473 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox17Q61473 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox17Q61473 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sox17Q61473 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sox17Q61473 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Sox17Q61473 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.24■□□□□ 0.83
Sox17Q61473 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sox17Q61473 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sox17Q61473 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Sox17Q61473 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox17Q61473 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.23■□□□□ 0.83
Sox17Q61473 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox17Q61473 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox17Q61473 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms