Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
Ptch1Q61115 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Ptch1Q61115 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Ptch1Q61115 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ptch1Q61115 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Ptch1Q61115 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
Ptch1Q61115 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ptch1Q61115 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ptch1Q61115 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC32.53■■■□□ 2.8
Ptch1Q61115 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Ptch1Q61115 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Ptch1Q61115 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Ptch1Q61115 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
Ptch1Q61115 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Ptch1Q61115 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC32.5■■■□□ 2.79
Ptch1Q61115 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC32.5■■■□□ 2.79
Ptch1Q61115 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ptch1Q61115 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ptch1Q61115 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ptch1Q61115 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ptch1Q61115 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Ptch1Q61115 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC32.49■■■□□ 2.79
Ptch1Q61115 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Ptch1Q61115 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ptch1Q61115 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ptch1Q61115 Nsd1-206ENSMUST00000224918 1001 ntBASIC32.47■■■□□ 2.79
Ptch1Q61115 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Ptch1Q61115 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ptch1Q61115 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC32.47■■■□□ 2.79
Ptch1Q61115 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC32.45■■■□□ 2.79
Ptch1Q61115 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ptch1Q61115 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ptch1Q61115 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Ptch1Q61115 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ptch1Q61115 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Ptch1Q61115 Golgb1-201ENSMUST00000023534 498 ntBASIC32.43■■■□□ 2.78
Ptch1Q61115 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ptch1Q61115 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Ptch1Q61115 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
Ptch1Q61115 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ptch1Q61115 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ptch1Q61115 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
Ptch1Q61115 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC32.42■■■□□ 2.78
Ptch1Q61115 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ptch1Q61115 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ptch1Q61115 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ptch1Q61115 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ptch1Q61115 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC32.41■■■□□ 2.78
Ptch1Q61115 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC32.41■■■□□ 2.78
Ptch1Q61115 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ptch1Q61115 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Ptch1Q61115 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Ptch1Q61115 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ptch1Q61115 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ptch1Q61115 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Ptch1Q61115 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ptch1Q61115 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Ptch1Q61115 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC32.39■■■□□ 2.78
Ptch1Q61115 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ptch1Q61115 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ptch1Q61115 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ptch1Q61115 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC32.37■■■□□ 2.77
Ptch1Q61115 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Ptch1Q61115 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ptch1Q61115 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ptch1Q61115 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ptch1Q61115 Gm10399-202ENSMUST00000202768 748 ntBASIC32.36■■■□□ 2.77
Ptch1Q61115 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ptch1Q61115 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ptch1Q61115 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
Ptch1Q61115 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ptch1Q61115 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ptch1Q61115 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ptch1Q61115 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ptch1Q61115 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC32.34■■■□□ 2.77
Ptch1Q61115 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ptch1Q61115 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
Ptch1Q61115 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
Ptch1Q61115 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ptch1Q61115 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ptch1Q61115 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC32.34■■■□□ 2.77
Ptch1Q61115 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Ptch1Q61115 Fezf2-202ENSMUST00000224023 1917 ntBASIC32.33■■■□□ 2.77
Ptch1Q61115 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC32.33■■■□□ 2.77
Ptch1Q61115 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC32.33■■■□□ 2.77
Ptch1Q61115 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ptch1Q61115 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ptch1Q61115 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC32.32■■■□□ 2.76
Ptch1Q61115 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Ptch1Q61115 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ptch1Q61115 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ptch1Q61115 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC32.31■■■□□ 2.76
Ptch1Q61115 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Ptch1Q61115 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Ptch1Q61115 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Ptch1Q61115 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ptch1Q61115 Gm8495-201ENSMUST00000188740 694 ntBASIC32.3■■■□□ 2.76
Ptch1Q61115 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ptch1Q61115 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ptch1Q61115 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms