Protein–RNA interactions for Protein: Q60793

Klf4, Krueppel-like factor 4, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf4Q60793 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Klf4Q60793 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Klf4Q60793 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Klf4Q60793 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Klf4Q60793 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Klf4Q60793 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Klf4Q60793 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.66■□□□□ 0.9
Klf4Q60793 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Klf4Q60793 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Klf4Q60793 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Klf4Q60793 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Klf4Q60793 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Klf4Q60793 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Klf4Q60793 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Klf4Q60793 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Klf4Q60793 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Klf4Q60793 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Klf4Q60793 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Klf4Q60793 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.64■□□□□ 0.89
Klf4Q60793 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.64■□□□□ 0.89
Klf4Q60793 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Klf4Q60793 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Klf4Q60793 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.64■□□□□ 0.89
Klf4Q60793 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Klf4Q60793 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Klf4Q60793 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Klf4Q60793 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.63■□□□□ 0.89
Klf4Q60793 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Klf4Q60793 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Klf4Q60793 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Klf4Q60793 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Klf4Q60793 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Klf4Q60793 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Klf4Q60793 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Klf4Q60793 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Klf4Q60793 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.62■□□□□ 0.89
Klf4Q60793 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.62■□□□□ 0.89
Klf4Q60793 Gm6311-201ENSMUST00000073790 878 ntBASIC20.62■□□□□ 0.89
Klf4Q60793 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Klf4Q60793 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Klf4Q60793 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Klf4Q60793 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Klf4Q60793 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Klf4Q60793 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Klf4Q60793 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Klf4Q60793 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Klf4Q60793 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.6■□□□□ 0.89
Klf4Q60793 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.6■□□□□ 0.89
Klf4Q60793 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klf4Q60793 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klf4Q60793 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klf4Q60793 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klf4Q60793 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Klf4Q60793 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klf4Q60793 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.58■□□□□ 0.89
Klf4Q60793 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Klf4Q60793 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.58■□□□□ 0.88
Klf4Q60793 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Klf4Q60793 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.58■□□□□ 0.88
Klf4Q60793 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Klf4Q60793 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Klf4Q60793 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Klf4Q60793 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.57■□□□□ 0.88
Klf4Q60793 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Klf4Q60793 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Klf4Q60793 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Klf4Q60793 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Klf4Q60793 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Klf4Q60793 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Klf4Q60793 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Klf4Q60793 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Klf4Q60793 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Klf4Q60793 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Klf4Q60793 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.56■□□□□ 0.88
Klf4Q60793 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Klf4Q60793 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Klf4Q60793 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Klf4Q60793 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Klf4Q60793 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Klf4Q60793 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Klf4Q60793 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.54■□□□□ 0.88
Klf4Q60793 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Klf4Q60793 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.53■□□□□ 0.88
Klf4Q60793 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Klf4Q60793 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Klf4Q60793 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Klf4Q60793 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.53■□□□□ 0.88
Klf4Q60793 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.53■□□□□ 0.88
Klf4Q60793 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Klf4Q60793 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Klf4Q60793 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Klf4Q60793 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Klf4Q60793 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Klf4Q60793 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Klf4Q60793 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Klf4Q60793 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.51■□□□□ 0.87
Klf4Q60793 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Klf4Q60793 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Klf4Q60793 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Klf4Q60793 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms