Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Trav6-2Q5R1I4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav6-2Q5R1I4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6-2Q5R1I4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.26■□□□□ 0.67
Trav6-2Q5R1I4 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.26■□□□□ 0.67
Trav6-2Q5R1I4 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.25■□□□□ 0.67
Trav6-2Q5R1I4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-2Q5R1I4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.25■□□□□ 0.67
Trav6-2Q5R1I4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-2Q5R1I4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Trav6-2Q5R1I4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-2Q5R1I4 Gm7417-201ENSMUST00000192950 473 ntBASIC19.24■□□□□ 0.67
Trav6-2Q5R1I4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Trav6-2Q5R1I4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-2Q5R1I4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-2Q5R1I4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-2Q5R1I4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav6-2Q5R1I4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-2Q5R1I4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-2Q5R1I4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-2Q5R1I4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-2Q5R1I4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-2Q5R1I4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-2Q5R1I4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-2Q5R1I4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-2Q5R1I4 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.21■□□□□ 0.67
Trav6-2Q5R1I4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-2Q5R1I4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.21■□□□□ 0.67
Trav6-2Q5R1I4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-2Q5R1I4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-2Q5R1I4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-2Q5R1I4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-2Q5R1I4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.2■□□□□ 0.66
Trav6-2Q5R1I4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trav6-2Q5R1I4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-2Q5R1I4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trav6-2Q5R1I4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-2Q5R1I4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-2Q5R1I4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trav6-2Q5R1I4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
Trav6-2Q5R1I4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-2Q5R1I4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trav6-2Q5R1I4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-2Q5R1I4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-2Q5R1I4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6-2Q5R1I4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav6-2Q5R1I4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6-2Q5R1I4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6-2Q5R1I4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav6-2Q5R1I4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trav6-2Q5R1I4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-2Q5R1I4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-2Q5R1I4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-2Q5R1I4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-2Q5R1I4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.16■□□□□ 0.66
Trav6-2Q5R1I4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-2Q5R1I4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.16■□□□□ 0.66
Trav6-2Q5R1I4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.16■□□□□ 0.66
Trav6-2Q5R1I4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Trav6-2Q5R1I4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-2Q5R1I4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-2Q5R1I4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav6-2Q5R1I4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.14■□□□□ 0.65
Trav6-2Q5R1I4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-2Q5R1I4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.14■□□□□ 0.65
Trav6-2Q5R1I4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-2Q5R1I4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trav6-2Q5R1I4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.14■□□□□ 0.65
Trav6-2Q5R1I4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-2Q5R1I4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-2Q5R1I4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6-2Q5R1I4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6-2Q5R1I4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.13■□□□□ 0.65
Trav6-2Q5R1I4 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.13■□□□□ 0.65
Trav6-2Q5R1I4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.13■□□□□ 0.65
Trav6-2Q5R1I4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav6-2Q5R1I4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Trav6-2Q5R1I4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms