Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Gm9806-201ENSMUST00000051080 552 ntBASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-2Q5R1I3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-2Q5R1I3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-2Q5R1I3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-2Q5R1I3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-2Q5R1I3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-2Q5R1I3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Scarna2-201ENSMUST00000157560 414 ntBASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav7-2Q5R1I3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-2Q5R1I3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Trav7-2Q5R1I3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-2Q5R1I3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-2Q5R1I3 Gm11687-201ENSMUST00000118911 886 ntBASIC16.02■□□□□ 0.16
Trav7-2Q5R1I3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7-2Q5R1I3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7-2Q5R1I3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-2Q5R1I3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-2Q5R1I3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-2Q5R1I3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-2Q5R1I3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-2Q5R1I3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav7-2Q5R1I3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trav7-2Q5R1I3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-2Q5R1I3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Gm13042-201ENSMUST00000119244 1955 ntBASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-2Q5R1I3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav7-2Q5R1I3 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.98■□□□□ 0.15
Trav7-2Q5R1I3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav7-2Q5R1I3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav7-2Q5R1I3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-2Q5R1I3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-2Q5R1I3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-2Q5R1I3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-2Q5R1I3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Gm16437-201ENSMUST00000025669 507 ntBASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.97■□□□□ 0.15
Trav7-2Q5R1I3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-2Q5R1I3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-2Q5R1I3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav7-2Q5R1I3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-2Q5R1I3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-2Q5R1I3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav7-2Q5R1I3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.96■□□□□ 0.14
Trav7-2Q5R1I3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav7-2Q5R1I3 Gm44428-201ENSMUST00000204474 874 ntBASIC15.95■□□□□ 0.14
Trav7-2Q5R1I3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav7-2Q5R1I3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-2Q5R1I3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-2Q5R1I3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav7-2Q5R1I3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-2Q5R1I3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav7-2Q5R1I3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Trav7-2Q5R1I3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms