Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Foxr1Q3UTB7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Foxr1Q3UTB7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxr1Q3UTB7 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.32■■□□□ 1.16
Foxr1Q3UTB7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxr1Q3UTB7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxr1Q3UTB7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Foxr1Q3UTB7 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.31■■□□□ 1.16
Foxr1Q3UTB7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Foxr1Q3UTB7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxr1Q3UTB7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Foxr1Q3UTB7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Foxr1Q3UTB7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.3■■□□□ 1.16
Foxr1Q3UTB7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxr1Q3UTB7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxr1Q3UTB7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Foxr1Q3UTB7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Foxr1Q3UTB7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxr1Q3UTB7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.28■■□□□ 1.16
Foxr1Q3UTB7 Rps24-207ENSMUST00000224568 714 ntBASIC22.28■■□□□ 1.16
Foxr1Q3UTB7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxr1Q3UTB7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxr1Q3UTB7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Foxr1Q3UTB7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxr1Q3UTB7 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.27■■□□□ 1.16
Foxr1Q3UTB7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxr1Q3UTB7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Foxr1Q3UTB7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxr1Q3UTB7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxr1Q3UTB7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.26■■□□□ 1.15
Foxr1Q3UTB7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxr1Q3UTB7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.26■■□□□ 1.15
Foxr1Q3UTB7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Foxr1Q3UTB7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Foxr1Q3UTB7 Gm22567-201ENSMUST00000175542 342 ntBASIC22.25■■□□□ 1.15
Foxr1Q3UTB7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.25■■□□□ 1.15
Foxr1Q3UTB7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.25■■□□□ 1.15
Foxr1Q3UTB7 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.25■■□□□ 1.15
Foxr1Q3UTB7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Foxr1Q3UTB7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Foxr1Q3UTB7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Foxr1Q3UTB7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.25■■□□□ 1.15
Foxr1Q3UTB7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxr1Q3UTB7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxr1Q3UTB7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxr1Q3UTB7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxr1Q3UTB7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxr1Q3UTB7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxr1Q3UTB7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxr1Q3UTB7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxr1Q3UTB7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.23■■□□□ 1.15
Foxr1Q3UTB7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxr1Q3UTB7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Foxr1Q3UTB7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxr1Q3UTB7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxr1Q3UTB7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxr1Q3UTB7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxr1Q3UTB7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxr1Q3UTB7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Foxr1Q3UTB7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Foxr1Q3UTB7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.21■■□□□ 1.15
Foxr1Q3UTB7 Gm45102-201ENSMUST00000207427 857 ntBASIC22.21■■□□□ 1.15
Foxr1Q3UTB7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxr1Q3UTB7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Foxr1Q3UTB7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.2■■□□□ 1.14
Foxr1Q3UTB7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxr1Q3UTB7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxr1Q3UTB7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxr1Q3UTB7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxr1Q3UTB7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxr1Q3UTB7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxr1Q3UTB7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxr1Q3UTB7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Foxr1Q3UTB7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Foxr1Q3UTB7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxr1Q3UTB7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
Foxr1Q3UTB7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxr1Q3UTB7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxr1Q3UTB7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Foxr1Q3UTB7 Gm9959-201ENSMUST00000068277 390 ntBASIC22.17■■□□□ 1.14
Foxr1Q3UTB7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxr1Q3UTB7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxr1Q3UTB7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxr1Q3UTB7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxr1Q3UTB7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.16■■□□□ 1.14
Foxr1Q3UTB7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.16■■□□□ 1.14
Foxr1Q3UTB7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Foxr1Q3UTB7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxr1Q3UTB7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.15■■□□□ 1.14
Foxr1Q3UTB7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Foxr1Q3UTB7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms