Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.17■■□□□ 1.14
Naf1Q3UMQ8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Naf1Q3UMQ8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Naf1Q3UMQ8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Naf1Q3UMQ8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Naf1Q3UMQ8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Naf1Q3UMQ8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Naf1Q3UMQ8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Naf1Q3UMQ8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Naf1Q3UMQ8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Naf1Q3UMQ8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Naf1Q3UMQ8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Naf1Q3UMQ8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Naf1Q3UMQ8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Naf1Q3UMQ8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Naf1Q3UMQ8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.14■■□□□ 1.13
Naf1Q3UMQ8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Naf1Q3UMQ8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Naf1Q3UMQ8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.13■■□□□ 1.13
Naf1Q3UMQ8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Naf1Q3UMQ8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Naf1Q3UMQ8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Naf1Q3UMQ8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Naf1Q3UMQ8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.12■■□□□ 1.13
Naf1Q3UMQ8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Naf1Q3UMQ8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Naf1Q3UMQ8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
Naf1Q3UMQ8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Naf1Q3UMQ8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.11■■□□□ 1.13
Naf1Q3UMQ8 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.11■■□□□ 1.13
Naf1Q3UMQ8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Naf1Q3UMQ8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Naf1Q3UMQ8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Naf1Q3UMQ8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.1■■□□□ 1.13
Naf1Q3UMQ8 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.1■■□□□ 1.13
Naf1Q3UMQ8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.1■■□□□ 1.13
Naf1Q3UMQ8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Naf1Q3UMQ8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Naf1Q3UMQ8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Naf1Q3UMQ8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.09■■□□□ 1.13
Naf1Q3UMQ8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Naf1Q3UMQ8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Naf1Q3UMQ8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Naf1Q3UMQ8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Naf1Q3UMQ8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Naf1Q3UMQ8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Naf1Q3UMQ8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Naf1Q3UMQ8 Gm22567-201ENSMUST00000175542 342 ntBASIC22.08■■□□□ 1.13
Naf1Q3UMQ8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.08■■□□□ 1.13
Naf1Q3UMQ8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Naf1Q3UMQ8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Naf1Q3UMQ8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Naf1Q3UMQ8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Naf1Q3UMQ8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Naf1Q3UMQ8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Naf1Q3UMQ8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Naf1Q3UMQ8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Naf1Q3UMQ8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Naf1Q3UMQ8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Naf1Q3UMQ8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Naf1Q3UMQ8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Naf1Q3UMQ8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Naf1Q3UMQ8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Naf1Q3UMQ8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Naf1Q3UMQ8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Naf1Q3UMQ8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Naf1Q3UMQ8 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.05■■□□□ 1.12
Naf1Q3UMQ8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Naf1Q3UMQ8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Naf1Q3UMQ8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Naf1Q3UMQ8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Naf1Q3UMQ8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Naf1Q3UMQ8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Naf1Q3UMQ8 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.04■■□□□ 1.12
Naf1Q3UMQ8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Naf1Q3UMQ8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Naf1Q3UMQ8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Naf1Q3UMQ8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Naf1Q3UMQ8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Naf1Q3UMQ8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Naf1Q3UMQ8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.03■■□□□ 1.12
Naf1Q3UMQ8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Naf1Q3UMQ8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Naf1Q3UMQ8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.02■■□□□ 1.12
Naf1Q3UMQ8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.02■■□□□ 1.12
Naf1Q3UMQ8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Naf1Q3UMQ8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Naf1Q3UMQ8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Naf1Q3UMQ8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms