Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smcr8Q3UMB5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.37■■□□□ 1.33
Smcr8Q3UMB5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smcr8Q3UMB5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.37■■□□□ 1.33
Smcr8Q3UMB5 Rps24-207ENSMUST00000224568 714 ntBASIC23.37■■□□□ 1.33
Smcr8Q3UMB5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.37■■□□□ 1.33
Smcr8Q3UMB5 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.37■■□□□ 1.33
Smcr8Q3UMB5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Smcr8Q3UMB5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smcr8Q3UMB5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
Smcr8Q3UMB5 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smcr8Q3UMB5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.34■■□□□ 1.33
Smcr8Q3UMB5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smcr8Q3UMB5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Smcr8Q3UMB5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smcr8Q3UMB5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smcr8Q3UMB5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.33■■□□□ 1.33
Smcr8Q3UMB5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Smcr8Q3UMB5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smcr8Q3UMB5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smcr8Q3UMB5 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.33■■□□□ 1.33
Smcr8Q3UMB5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smcr8Q3UMB5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Smcr8Q3UMB5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smcr8Q3UMB5 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.32■■□□□ 1.32
Smcr8Q3UMB5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smcr8Q3UMB5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smcr8Q3UMB5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Smcr8Q3UMB5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smcr8Q3UMB5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smcr8Q3UMB5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smcr8Q3UMB5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smcr8Q3UMB5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.31■■□□□ 1.32
Smcr8Q3UMB5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smcr8Q3UMB5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smcr8Q3UMB5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Smcr8Q3UMB5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
Smcr8Q3UMB5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Smcr8Q3UMB5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smcr8Q3UMB5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.29■■□□□ 1.32
Smcr8Q3UMB5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smcr8Q3UMB5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Smcr8Q3UMB5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smcr8Q3UMB5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smcr8Q3UMB5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smcr8Q3UMB5 Gm10232-201ENSMUST00000089221 720 ntBASIC23.28■■□□□ 1.32
Smcr8Q3UMB5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smcr8Q3UMB5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smcr8Q3UMB5 Gm14117-201ENSMUST00000122417 843 ntBASIC23.27■■□□□ 1.32
Smcr8Q3UMB5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.27■■□□□ 1.32
Smcr8Q3UMB5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smcr8Q3UMB5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smcr8Q3UMB5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Smcr8Q3UMB5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smcr8Q3UMB5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smcr8Q3UMB5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smcr8Q3UMB5 Gm45102-201ENSMUST00000207427 857 ntBASIC23.26■■□□□ 1.31
Smcr8Q3UMB5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smcr8Q3UMB5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smcr8Q3UMB5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Smcr8Q3UMB5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smcr8Q3UMB5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smcr8Q3UMB5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smcr8Q3UMB5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smcr8Q3UMB5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smcr8Q3UMB5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smcr8Q3UMB5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Smcr8Q3UMB5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Smcr8Q3UMB5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Smcr8Q3UMB5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Smcr8Q3UMB5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smcr8Q3UMB5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smcr8Q3UMB5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
Smcr8Q3UMB5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smcr8Q3UMB5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smcr8Q3UMB5 Gm9959-201ENSMUST00000068277 390 ntBASIC23.23■■□□□ 1.31
Smcr8Q3UMB5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smcr8Q3UMB5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smcr8Q3UMB5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smcr8Q3UMB5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smcr8Q3UMB5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Smcr8Q3UMB5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms