Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1bP97952 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1bP97952 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1bP97952 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1bP97952 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Scn1bP97952 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1bP97952 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn1bP97952 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.82■□□□□ 0.76
Scn1bP97952 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1bP97952 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1bP97952 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn1bP97952 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1bP97952 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1bP97952 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1bP97952 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn1bP97952 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.8■□□□□ 0.76
Scn1bP97952 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Scn1bP97952 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn1bP97952 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn1bP97952 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Scn1bP97952 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Scn1bP97952 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn1bP97952 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn1bP97952 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1bP97952 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1bP97952 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn1bP97952 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1bP97952 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1bP97952 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1bP97952 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1bP97952 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1bP97952 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn1bP97952 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Scn1bP97952 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn1bP97952 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn1bP97952 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scn1bP97952 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Scn1bP97952 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn1bP97952 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.76■□□□□ 0.75
Scn1bP97952 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1bP97952 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1bP97952 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn1bP97952 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1bP97952 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn1bP97952 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scn1bP97952 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1bP97952 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1bP97952 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Scn1bP97952 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1bP97952 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scn1bP97952 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1bP97952 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.75■□□□□ 0.75
Scn1bP97952 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1bP97952 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1bP97952 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1bP97952 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn1bP97952 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1bP97952 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1bP97952 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1bP97952 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1bP97952 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn1bP97952 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1bP97952 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1bP97952 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Scn1bP97952 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Scn1bP97952 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.73■□□□□ 0.75
Scn1bP97952 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1bP97952 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1bP97952 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1bP97952 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn1bP97952 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1bP97952 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Scn1bP97952 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1bP97952 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1bP97952 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1bP97952 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Scn1bP97952 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1bP97952 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn1bP97952 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scn1bP97952 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scn1bP97952 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1bP97952 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1bP97952 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Scn1bP97952 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1bP97952 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1bP97952 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1bP97952 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1bP97952 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1bP97952 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1bP97952 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn1bP97952 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Scn1bP97952 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Scn1bP97952 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1bP97952 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1bP97952 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1bP97952 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1bP97952 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Scn1bP97952 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1bP97952 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Scn1bP97952 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms