Protein–RNA interactions for Protein: P84078

Arf1, ADP-ribosylation factor 1, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arf1P84078 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Arf1P84078 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Arf1P84078 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.23■□□□□ 0.67
Arf1P84078 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Arf1P84078 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.22■□□□□ 0.67
Arf1P84078 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.22■□□□□ 0.67
Arf1P84078 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Arf1P84078 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Arf1P84078 Gm10420-201ENSMUST00000121713 882 ntBASIC19.21■□□□□ 0.67
Arf1P84078 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arf1P84078 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.21■□□□□ 0.67
Arf1P84078 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arf1P84078 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Arf1P84078 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.21■□□□□ 0.67
Arf1P84078 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Arf1P84078 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arf1P84078 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arf1P84078 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arf1P84078 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arf1P84078 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arf1P84078 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arf1P84078 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arf1P84078 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arf1P84078 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arf1P84078 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arf1P84078 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arf1P84078 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arf1P84078 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arf1P84078 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.19■□□□□ 0.66
Arf1P84078 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arf1P84078 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Arf1P84078 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Arf1P84078 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Arf1P84078 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Arf1P84078 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Arf1P84078 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Arf1P84078 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.18■□□□□ 0.66
Arf1P84078 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Arf1P84078 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Arf1P84078 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Arf1P84078 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Arf1P84078 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.17■□□□□ 0.66
Arf1P84078 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Arf1P84078 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.17■□□□□ 0.66
Arf1P84078 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Arf1P84078 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Arf1P84078 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Arf1P84078 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Arf1P84078 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Arf1P84078 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Arf1P84078 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Arf1P84078 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Arf1P84078 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Arf1P84078 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.16■□□□□ 0.66
Arf1P84078 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Arf1P84078 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Arf1P84078 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Arf1P84078 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Arf1P84078 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Arf1P84078 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Arf1P84078 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Arf1P84078 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Arf1P84078 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Arf1P84078 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Arf1P84078 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Arf1P84078 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Arf1P84078 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.14■□□□□ 0.65
Arf1P84078 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Arf1P84078 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Arf1P84078 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Arf1P84078 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Arf1P84078 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Arf1P84078 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Arf1P84078 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Arf1P84078 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Arf1P84078 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Arf1P84078 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Arf1P84078 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Arf1P84078 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Arf1P84078 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Arf1P84078 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Arf1P84078 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Arf1P84078 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Arf1P84078 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.11■□□□□ 0.65
Arf1P84078 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.11■□□□□ 0.65
Arf1P84078 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Arf1P84078 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Arf1P84078 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Arf1P84078 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Arf1P84078 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Arf1P84078 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Arf1P84078 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Arf1P84078 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Arf1P84078 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Arf1P84078 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Arf1P84078 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.1■□□□□ 0.65
Arf1P84078 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Arf1P84078 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Arf1P84078 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Arf1P84078 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms