Protein–RNA interactions for Protein: P62823

Rab3c, Ras-related protein Rab-3C, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3cP62823 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3cP62823 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rab3cP62823 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3cP62823 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rab3cP62823 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3cP62823 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3cP62823 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3cP62823 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3cP62823 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3cP62823 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3cP62823 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rab3cP62823 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.41■□□□□ 0.54
Rab3cP62823 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rab3cP62823 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab3cP62823 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3cP62823 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3cP62823 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3cP62823 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rab3cP62823 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3cP62823 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3cP62823 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rab3cP62823 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3cP62823 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3cP62823 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3cP62823 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3cP62823 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3cP62823 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Rab3cP62823 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3cP62823 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3cP62823 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3cP62823 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3cP62823 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3cP62823 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab3cP62823 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab3cP62823 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab3cP62823 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.38■□□□□ 0.53
Rab3cP62823 Gm22567-201ENSMUST00000175542 342 ntBASIC18.38■□□□□ 0.53
Rab3cP62823 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.38■□□□□ 0.53
Rab3cP62823 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.38■□□□□ 0.53
Rab3cP62823 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab3cP62823 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab3cP62823 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab3cP62823 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rab3cP62823 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rab3cP62823 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rab3cP62823 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.37■□□□□ 0.53
Rab3cP62823 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rab3cP62823 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab3cP62823 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.37■□□□□ 0.53
Rab3cP62823 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab3cP62823 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rab3cP62823 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.37■□□□□ 0.53
Rab3cP62823 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rab3cP62823 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab3cP62823 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab3cP62823 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab3cP62823 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.36■□□□□ 0.53
Rab3cP62823 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab3cP62823 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rab3cP62823 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab3cP62823 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rab3cP62823 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab3cP62823 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.35■□□□□ 0.53
Rab3cP62823 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab3cP62823 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rab3cP62823 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.35■□□□□ 0.53
Rab3cP62823 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rab3cP62823 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab3cP62823 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Rab3cP62823 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3cP62823 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rab3cP62823 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3cP62823 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3cP62823 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3cP62823 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rab3cP62823 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3cP62823 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3cP62823 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rab3cP62823 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.33■□□□□ 0.53
Rab3cP62823 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.33■□□□□ 0.53
Rab3cP62823 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.33■□□□□ 0.52
Rab3cP62823 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3cP62823 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3cP62823 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3cP62823 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3cP62823 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3cP62823 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3cP62823 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3cP62823 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rab3cP62823 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3cP62823 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3cP62823 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3cP62823 Notumos-201ENSMUST00000151998 2659 ntBASIC18.31■□□□□ 0.52
Rab3cP62823 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3cP62823 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3cP62823 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3cP62823 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3cP62823 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rab3cP62823 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3cP62823 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms