Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox18P43680 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox18P43680 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.94■□□□□ 0.94
Sox18P43680 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.94■□□□□ 0.94
Sox18P43680 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox18P43680 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox18P43680 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Sox18P43680 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Sox18P43680 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox18P43680 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox18P43680 Gm45417-201ENSMUST00000209533 758 ntBASIC20.93■□□□□ 0.94
Sox18P43680 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox18P43680 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox18P43680 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox18P43680 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sox18P43680 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox18P43680 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sox18P43680 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox18P43680 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sox18P43680 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sox18P43680 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sox18P43680 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.91■□□□□ 0.94
Sox18P43680 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.91■□□□□ 0.94
Sox18P43680 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sox18P43680 Gm8495-201ENSMUST00000188740 694 ntBASIC20.91■□□□□ 0.94
Sox18P43680 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sox18P43680 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sox18P43680 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.9■□□□□ 0.94
Sox18P43680 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.9■□□□□ 0.94
Sox18P43680 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox18P43680 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Sox18P43680 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sox18P43680 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.89■□□□□ 0.93
Sox18P43680 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Sox18P43680 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sox18P43680 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sox18P43680 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox18P43680 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.88■□□□□ 0.93
Sox18P43680 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox18P43680 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sox18P43680 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sox18P43680 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.88■□□□□ 0.93
Sox18P43680 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sox18P43680 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox18P43680 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sox18P43680 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sox18P43680 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.87■□□□□ 0.93
Sox18P43680 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox18P43680 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Sox18P43680 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox18P43680 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox18P43680 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox18P43680 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox18P43680 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sox18P43680 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.86■□□□□ 0.93
Sox18P43680 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sox18P43680 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sox18P43680 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sox18P43680 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox18P43680 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox18P43680 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox18P43680 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sox18P43680 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sox18P43680 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox18P43680 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.85■□□□□ 0.93
Sox18P43680 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox18P43680 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.84■□□□□ 0.93
Sox18P43680 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sox18P43680 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.84■□□□□ 0.93
Sox18P43680 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox18P43680 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox18P43680 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sox18P43680 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Sox18P43680 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox18P43680 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox18P43680 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sox18P43680 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox18P43680 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Sox18P43680 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.82■□□□□ 0.92
Sox18P43680 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox18P43680 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox18P43680 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.82■□□□□ 0.92
Sox18P43680 Gm18284-201ENSMUST00000172604 624 ntBASIC20.81■□□□□ 0.92
Sox18P43680 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox18P43680 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sox18P43680 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox18P43680 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox18P43680 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sox18P43680 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox18P43680 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sox18P43680 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox18P43680 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sox18P43680 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.79■□□□□ 0.92
Sox18P43680 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox18P43680 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sox18P43680 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sox18P43680 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sox18P43680 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox18P43680 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox18P43680 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms