Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf9P41274 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf9P41274 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf9P41274 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfsf9P41274 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Tnfsf9P41274 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfsf9P41274 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Tnfsf9P41274 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Tnfsf9P41274 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfsf9P41274 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfsf9P41274 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfsf9P41274 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Tnfsf9P41274 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfsf9P41274 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsf9P41274 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tnfsf9P41274 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsf9P41274 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsf9P41274 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.81■□□□□ 0.92
Tnfsf9P41274 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.81■□□□□ 0.92
Tnfsf9P41274 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsf9P41274 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf9P41274 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.8■□□□□ 0.92
Tnfsf9P41274 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf9P41274 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf9P41274 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf9P41274 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf9P41274 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.8■□□□□ 0.92
Tnfsf9P41274 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.8■□□□□ 0.92
Tnfsf9P41274 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf9P41274 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf9P41274 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf9P41274 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf9P41274 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.79■□□□□ 0.92
Tnfsf9P41274 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tnfsf9P41274 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf9P41274 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf9P41274 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf9P41274 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.78■□□□□ 0.92
Tnfsf9P41274 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf9P41274 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf9P41274 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.78■□□□□ 0.92
Tnfsf9P41274 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf9P41274 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf9P41274 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf9P41274 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf9P41274 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf9P41274 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf9P41274 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf9P41274 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf9P41274 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf9P41274 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf9P41274 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf9P41274 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf9P41274 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tnfsf9P41274 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf9P41274 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf9P41274 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf9P41274 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.75■□□□□ 0.91
Tnfsf9P41274 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf9P41274 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.75■□□□□ 0.91
Tnfsf9P41274 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.75■□□□□ 0.91
Tnfsf9P41274 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf9P41274 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf9P41274 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf9P41274 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsf9P41274 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.74■□□□□ 0.91
Tnfsf9P41274 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsf9P41274 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.74■□□□□ 0.91
Tnfsf9P41274 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tnfsf9P41274 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsf9P41274 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsf9P41274 Gm10232-201ENSMUST00000089221 720 ntBASIC20.73■□□□□ 0.91
Tnfsf9P41274 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsf9P41274 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfsf9P41274 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfsf9P41274 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Tnfsf9P41274 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsf9P41274 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsf9P41274 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.71■□□□□ 0.91
Tnfsf9P41274 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsf9P41274 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsf9P41274 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsf9P41274 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.7■□□□□ 0.91
Tnfsf9P41274 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf9P41274 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Tnfsf9P41274 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tnfsf9P41274 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf9P41274 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf9P41274 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf9P41274 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tnfsf9P41274 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf9P41274 Rps24-207ENSMUST00000224568 714 ntBASIC20.69■□□□□ 0.9
Tnfsf9P41274 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf9P41274 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf9P41274 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf9P41274 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfsf9P41274 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnfsf9P41274 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf9P41274 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf9P41274 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms