Protein–RNA interactions for Protein: P41155

Ltb, Lymphotoxin-beta, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbP41155 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LtbP41155 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LtbP41155 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
LtbP41155 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.79■□□□□ 0.6
LtbP41155 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.78■□□□□ 0.6
LtbP41155 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LtbP41155 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.78■□□□□ 0.6
LtbP41155 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.78■□□□□ 0.6
LtbP41155 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LtbP41155 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LtbP41155 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
LtbP41155 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LtbP41155 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LtbP41155 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LtbP41155 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LtbP41155 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LtbP41155 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LtbP41155 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LtbP41155 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LtbP41155 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LtbP41155 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LtbP41155 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LtbP41155 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LtbP41155 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.75■□□□□ 0.59
LtbP41155 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LtbP41155 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.75■□□□□ 0.59
LtbP41155 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LtbP41155 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LtbP41155 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LtbP41155 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LtbP41155 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LtbP41155 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LtbP41155 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LtbP41155 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LtbP41155 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LtbP41155 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LtbP41155 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LtbP41155 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LtbP41155 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.73■□□□□ 0.59
LtbP41155 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LtbP41155 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LtbP41155 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LtbP41155 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LtbP41155 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LtbP41155 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LtbP41155 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LtbP41155 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LtbP41155 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.71■□□□□ 0.59
LtbP41155 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LtbP41155 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
LtbP41155 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtbP41155 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LtbP41155 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.7■□□□□ 0.58
LtbP41155 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LtbP41155 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LtbP41155 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LtbP41155 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtbP41155 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LtbP41155 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtbP41155 Gm15546-201ENSMUST00000122095 826 ntBASIC18.69■□□□□ 0.58
LtbP41155 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LtbP41155 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LtbP41155 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LtbP41155 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbP41155 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbP41155 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LtbP41155 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbP41155 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbP41155 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LtbP41155 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbP41155 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbP41155 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LtbP41155 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbP41155 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbP41155 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbP41155 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LtbP41155 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.67■□□□□ 0.58
LtbP41155 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbP41155 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbP41155 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbP41155 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbP41155 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.66■□□□□ 0.58
LtbP41155 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LtbP41155 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.66■□□□□ 0.58
LtbP41155 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LtbP41155 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LtbP41155 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.66■□□□□ 0.58
LtbP41155 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.65■□□□□ 0.58
LtbP41155 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbP41155 Gm22567-201ENSMUST00000175542 342 ntBASIC18.65■□□□□ 0.58
LtbP41155 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.65■□□□□ 0.58
LtbP41155 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbP41155 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbP41155 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LtbP41155 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbP41155 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LtbP41155 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LtbP41155 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.64■□□□□ 0.57
LtbP41155 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LtbP41155 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms