Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.89■■□□□ 1.26
Cxcl12P40224 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cxcl12P40224 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cxcl12P40224 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cxcl12P40224 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cxcl12P40224 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
Cxcl12P40224 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cxcl12P40224 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cxcl12P40224 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cxcl12P40224 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Cxcl12P40224 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cxcl12P40224 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cxcl12P40224 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cxcl12P40224 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cxcl12P40224 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cxcl12P40224 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cxcl12P40224 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cxcl12P40224 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cxcl12P40224 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cxcl12P40224 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cxcl12P40224 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.86■■□□□ 1.25
Cxcl12P40224 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cxcl12P40224 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cxcl12P40224 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cxcl12P40224 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cxcl12P40224 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cxcl12P40224 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.85■■□□□ 1.25
Cxcl12P40224 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cxcl12P40224 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.84■■□□□ 1.25
Cxcl12P40224 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cxcl12P40224 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cxcl12P40224 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cxcl12P40224 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cxcl12P40224 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cxcl12P40224 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.83■■□□□ 1.25
Cxcl12P40224 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cxcl12P40224 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
Cxcl12P40224 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cxcl12P40224 Amer2-203ENSMUST00000225247 2662 ntBASIC22.83■■□□□ 1.24
Cxcl12P40224 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cxcl12P40224 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cxcl12P40224 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cxcl12P40224 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cxcl12P40224 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cxcl12P40224 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cxcl12P40224 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.81■■□□□ 1.24
Cxcl12P40224 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.81■■□□□ 1.24
Cxcl12P40224 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cxcl12P40224 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cxcl12P40224 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cxcl12P40224 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.81■■□□□ 1.24
Cxcl12P40224 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.81■■□□□ 1.24
Cxcl12P40224 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cxcl12P40224 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.81■■□□□ 1.24
Cxcl12P40224 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.81■■□□□ 1.24
Cxcl12P40224 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.81■■□□□ 1.24
Cxcl12P40224 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.81■■□□□ 1.24
Cxcl12P40224 Gm8495-201ENSMUST00000188740 694 ntBASIC22.81■■□□□ 1.24
Cxcl12P40224 Golgb1-201ENSMUST00000023534 498 ntBASIC22.81■■□□□ 1.24
Cxcl12P40224 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cxcl12P40224 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cxcl12P40224 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Cxcl12P40224 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Cxcl12P40224 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cxcl12P40224 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cxcl12P40224 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cxcl12P40224 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cxcl12P40224 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.79■■□□□ 1.24
Cxcl12P40224 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cxcl12P40224 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cxcl12P40224 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Cxcl12P40224 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cxcl12P40224 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cxcl12P40224 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.78■■□□□ 1.24
Cxcl12P40224 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Cxcl12P40224 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Cxcl12P40224 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cxcl12P40224 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cxcl12P40224 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cxcl12P40224 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.77■■□□□ 1.24
Cxcl12P40224 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.77■■□□□ 1.24
Cxcl12P40224 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.77■■□□□ 1.24
Cxcl12P40224 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Cxcl12P40224 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cxcl12P40224 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Cxcl12P40224 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cxcl12P40224 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cxcl12P40224 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Cxcl12P40224 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Cxcl12P40224 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cxcl12P40224 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cxcl12P40224 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cxcl12P40224 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cxcl12P40224 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.75■■□□□ 1.23
Cxcl12P40224 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.75■■□□□ 1.23
Cxcl12P40224 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.75■■□□□ 1.23
Cxcl12P40224 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cxcl12P40224 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cxcl12P40224 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Cxcl12P40224 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms