Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa3P35584 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa3P35584 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa3P35584 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa3P35584 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa3P35584 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa3P35584 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa3P35584 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Foxa3P35584 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa3P35584 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa3P35584 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa3P35584 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa3P35584 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa3P35584 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa3P35584 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Foxa3P35584 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa3P35584 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa3P35584 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa3P35584 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa3P35584 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa3P35584 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa3P35584 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Foxa3P35584 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa3P35584 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa3P35584 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Foxa3P35584 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa3P35584 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa3P35584 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.12■□□□□ 0.49
Foxa3P35584 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa3P35584 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Foxa3P35584 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa3P35584 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Foxa3P35584 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa3P35584 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.11■□□□□ 0.49
Foxa3P35584 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Foxa3P35584 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa3P35584 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Foxa3P35584 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Foxa3P35584 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.1■□□□□ 0.49
Foxa3P35584 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Foxa3P35584 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa3P35584 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa3P35584 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.09■□□□□ 0.49
Foxa3P35584 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa3P35584 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa3P35584 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa3P35584 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa3P35584 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa3P35584 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa3P35584 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.08■□□□□ 0.48
Foxa3P35584 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa3P35584 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa3P35584 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.07■□□□□ 0.48
Foxa3P35584 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa3P35584 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa3P35584 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Foxa3P35584 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa3P35584 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa3P35584 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa3P35584 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa3P35584 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Foxa3P35584 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Foxa3P35584 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa3P35584 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Foxa3P35584 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Foxa3P35584 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa3P35584 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa3P35584 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa3P35584 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa3P35584 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa3P35584 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Foxa3P35584 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Foxa3P35584 Gm22567-201ENSMUST00000175542 342 ntBASIC18.05■□□□□ 0.48
Foxa3P35584 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxa3P35584 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Foxa3P35584 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Foxa3P35584 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa3P35584 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Foxa3P35584 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa3P35584 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Foxa3P35584 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa3P35584 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa3P35584 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa3P35584 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa3P35584 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa3P35584 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa3P35584 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Foxa3P35584 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa3P35584 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa3P35584 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Foxa3P35584 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa3P35584 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa3P35584 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxa3P35584 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Foxa3P35584 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxa3P35584 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.02■□□□□ 0.48
Foxa3P35584 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Foxa3P35584 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.02■□□□□ 0.47
Foxa3P35584 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Foxa3P35584 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms