Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxa1P35582 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Foxa1P35582 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxa1P35582 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxa1P35582 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxa1P35582 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxa1P35582 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.14■□□□□ 0.81
Foxa1P35582 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxa1P35582 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Foxa1P35582 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxa1P35582 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxa1P35582 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxa1P35582 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Foxa1P35582 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxa1P35582 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.13■□□□□ 0.81
Foxa1P35582 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxa1P35582 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.12■□□□□ 0.81
Foxa1P35582 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.12■□□□□ 0.81
Foxa1P35582 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxa1P35582 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxa1P35582 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxa1P35582 Gm22567-201ENSMUST00000175542 342 ntBASIC20.11■□□□□ 0.81
Foxa1P35582 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Foxa1P35582 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.11■□□□□ 0.81
Foxa1P35582 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Foxa1P35582 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Foxa1P35582 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Foxa1P35582 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Foxa1P35582 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Foxa1P35582 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxa1P35582 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.1■□□□□ 0.81
Foxa1P35582 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Foxa1P35582 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Foxa1P35582 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Foxa1P35582 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Foxa1P35582 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Foxa1P35582 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Foxa1P35582 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxa1P35582 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxa1P35582 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Foxa1P35582 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxa1P35582 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Foxa1P35582 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Foxa1P35582 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Foxa1P35582 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Foxa1P35582 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Foxa1P35582 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.07■□□□□ 0.8
Foxa1P35582 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.07■□□□□ 0.8
Foxa1P35582 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Foxa1P35582 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa1P35582 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa1P35582 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.06■□□□□ 0.8
Foxa1P35582 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa1P35582 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa1P35582 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Foxa1P35582 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa1P35582 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa1P35582 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa1P35582 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa1P35582 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.05■□□□□ 0.8
Foxa1P35582 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa1P35582 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa1P35582 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa1P35582 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa1P35582 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.04■□□□□ 0.8
Foxa1P35582 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxa1P35582 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxa1P35582 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxa1P35582 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Foxa1P35582 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxa1P35582 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Foxa1P35582 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxa1P35582 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.03■□□□□ 0.8
Foxa1P35582 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxa1P35582 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa1P35582 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa1P35582 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa1P35582 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa1P35582 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa1P35582 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa1P35582 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Foxa1P35582 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa1P35582 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa1P35582 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa1P35582 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa1P35582 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa1P35582 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa1P35582 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxa1P35582 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Foxa1P35582 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Foxa1P35582 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxa1P35582 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxa1P35582 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20■□□□□ 0.79
Foxa1P35582 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxa1P35582 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxa1P35582 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms