Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccl1P10146 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccl1P10146 Zfp131-205ENSMUST00000223812 663 ntBASIC16.87■□□□□ 0.29
Ccl1P10146 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccl1P10146 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccl1P10146 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.87■□□□□ 0.29
Ccl1P10146 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Ccl1P10146 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccl1P10146 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl1P10146 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl1P10146 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl1P10146 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl1P10146 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl1P10146 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl1P10146 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl1P10146 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl1P10146 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl1P10146 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl1P10146 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl1P10146 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl1P10146 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl1P10146 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl1P10146 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl1P10146 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl1P10146 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccl1P10146 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl1P10146 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccl1P10146 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl1P10146 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl1P10146 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl1P10146 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.83■□□□□ 0.28
Ccl1P10146 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.83■□□□□ 0.28
Ccl1P10146 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl1P10146 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl1P10146 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccl1P10146 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl1P10146 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl1P10146 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl1P10146 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccl1P10146 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl1P10146 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl1P10146 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl1P10146 Notumos-201ENSMUST00000151998 2659 ntBASIC16.81■□□□□ 0.28
Ccl1P10146 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl1P10146 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.81■□□□□ 0.28
Ccl1P10146 Gm9397-201ENSMUST00000200125 605 ntBASIC16.81■□□□□ 0.28
Ccl1P10146 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccl1P10146 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl1P10146 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl1P10146 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl1P10146 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl1P10146 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccl1P10146 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.8■□□□□ 0.28
Ccl1P10146 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.8■□□□□ 0.28
Ccl1P10146 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl1P10146 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl1P10146 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl1P10146 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl1P10146 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl1P10146 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl1P10146 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl1P10146 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl1P10146 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl1P10146 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.78■□□□□ 0.28
Ccl1P10146 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl1P10146 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.78■□□□□ 0.28
Ccl1P10146 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl1P10146 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl1P10146 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl1P10146 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl1P10146 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl1P10146 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ccl1P10146 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl1P10146 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl1P10146 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.77■□□□□ 0.27
Ccl1P10146 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl1P10146 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl1P10146 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl1P10146 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl1P10146 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl1P10146 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl1P10146 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl1P10146 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl1P10146 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl1P10146 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl1P10146 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl1P10146 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl1P10146 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl1P10146 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl1P10146 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl1P10146 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccl1P10146 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl1P10146 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl1P10146 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl1P10146 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccl1P10146 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Ccl1P10146 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl1P10146 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.74■□□□□ 0.27
Ccl1P10146 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccl1P10146 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms