Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Egr1P08046 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Egr1P08046 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Egr1P08046 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.72■□□□□ 0.91
Egr1P08046 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.71■□□□□ 0.91
Egr1P08046 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Egr1P08046 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Egr1P08046 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.71■□□□□ 0.91
Egr1P08046 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.71■□□□□ 0.91
Egr1P08046 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Egr1P08046 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Egr1P08046 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Egr1P08046 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
Egr1P08046 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.71■□□□□ 0.91
Egr1P08046 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.7■□□□□ 0.9
Egr1P08046 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.7■□□□□ 0.9
Egr1P08046 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Egr1P08046 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Egr1P08046 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.69■□□□□ 0.9
Egr1P08046 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Egr1P08046 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Egr1P08046 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Egr1P08046 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Egr1P08046 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Egr1P08046 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Egr1P08046 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Egr1P08046 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Egr1P08046 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.67■□□□□ 0.9
Egr1P08046 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.66■□□□□ 0.9
Egr1P08046 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Egr1P08046 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.66■□□□□ 0.9
Egr1P08046 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.66■□□□□ 0.9
Egr1P08046 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Egr1P08046 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Egr1P08046 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.65■□□□□ 0.9
Egr1P08046 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Egr1P08046 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Egr1P08046 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Egr1P08046 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Egr1P08046 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.64■□□□□ 0.89
Egr1P08046 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Egr1P08046 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.64■□□□□ 0.89
Egr1P08046 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Egr1P08046 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.64■□□□□ 0.89
Egr1P08046 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.63■□□□□ 0.89
Egr1P08046 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Egr1P08046 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Egr1P08046 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Egr1P08046 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Egr1P08046 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Egr1P08046 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.62■□□□□ 0.89
Egr1P08046 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Egr1P08046 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Egr1P08046 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Egr1P08046 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Egr1P08046 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.62■□□□□ 0.89
Egr1P08046 Zxda-201ENSMUST00000117281 2621 ntBASIC20.62■□□□□ 0.89
Egr1P08046 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Egr1P08046 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.62■□□□□ 0.89
Egr1P08046 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Egr1P08046 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.61■□□□□ 0.89
Egr1P08046 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Egr1P08046 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Egr1P08046 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Egr1P08046 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Egr1P08046 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.6■□□□□ 0.89
Egr1P08046 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Egr1P08046 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Egr1P08046 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Egr1P08046 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Egr1P08046 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Egr1P08046 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Egr1P08046 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Egr1P08046 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Egr1P08046 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Egr1P08046 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Egr1P08046 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.58■□□□□ 0.89
Egr1P08046 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Egr1P08046 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Egr1P08046 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Egr1P08046 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Egr1P08046 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
Egr1P08046 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Egr1P08046 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Egr1P08046 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Egr1P08046 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Egr1P08046 Gm10399-202ENSMUST00000202768 748 ntBASIC20.56■□□□□ 0.88
Egr1P08046 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Egr1P08046 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Egr1P08046 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Egr1P08046 Gm6139-201ENSMUST00000079261 882 ntBASIC20.55■□□□□ 0.88
Egr1P08046 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Egr1P08046 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.54■□□□□ 0.88
Egr1P08046 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
Egr1P08046 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Egr1P08046 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.54■□□□□ 0.88
Egr1P08046 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Egr1P08046 Gm27011-201ENSMUST00000182352 972 ntBASIC20.53■□□□□ 0.88
Egr1P08046 Gm5874-201ENSMUST00000096101 508 ntBASIC20.53■□□□□ 0.88
Egr1P08046 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms