Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxa3P02831 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.14■□□□□ 0.49
Hoxa3P02831 Gm43566-201ENSMUST00000196851 808 ntBASIC18.14■□□□□ 0.49
Hoxa3P02831 Gm45444-201ENSMUST00000211394 898 ntBASIC18.14■□□□□ 0.49
Hoxa3P02831 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hoxa3P02831 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxa3P02831 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa3P02831 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa3P02831 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.13■□□□□ 0.49
Hoxa3P02831 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa3P02831 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hoxa3P02831 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa3P02831 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hoxa3P02831 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa3P02831 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa3P02831 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa3P02831 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa3P02831 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa3P02831 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa3P02831 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hoxa3P02831 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa3P02831 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa3P02831 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa3P02831 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa3P02831 Gm15546-201ENSMUST00000122095 826 ntBASIC18.11■□□□□ 0.49
Hoxa3P02831 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.11■□□□□ 0.49
Hoxa3P02831 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.11■□□□□ 0.49
Hoxa3P02831 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa3P02831 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa3P02831 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa3P02831 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa3P02831 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa3P02831 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hoxa3P02831 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa3P02831 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Hoxa3P02831 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa3P02831 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hoxa3P02831 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa3P02831 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxa3P02831 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxa3P02831 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxa3P02831 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxa3P02831 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.09■□□□□ 0.49
Hoxa3P02831 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.09■□□□□ 0.49
Hoxa3P02831 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.09■□□□□ 0.49
Hoxa3P02831 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxa3P02831 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.09■□□□□ 0.49
Hoxa3P02831 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxa3P02831 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxa3P02831 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxa3P02831 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxa3P02831 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Hoxa3P02831 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxa3P02831 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.08■□□□□ 0.48
Hoxa3P02831 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxa3P02831 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxa3P02831 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxa3P02831 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hoxa3P02831 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.07■□□□□ 0.48
Hoxa3P02831 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hoxa3P02831 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxa3P02831 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.07■□□□□ 0.48
Hoxa3P02831 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hoxa3P02831 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Hoxa3P02831 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Hoxa3P02831 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxa3P02831 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxa3P02831 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.05■□□□□ 0.48
Hoxa3P02831 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hoxa3P02831 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxa3P02831 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxa3P02831 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxa3P02831 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.04■□□□□ 0.48
Hoxa3P02831 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.04■□□□□ 0.48
Hoxa3P02831 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxa3P02831 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxa3P02831 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.04■□□□□ 0.48
Hoxa3P02831 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxa3P02831 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxa3P02831 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxa3P02831 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxa3P02831 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxa3P02831 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxa3P02831 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.03■□□□□ 0.48
Hoxa3P02831 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxa3P02831 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.03■□□□□ 0.48
Hoxa3P02831 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxa3P02831 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.03■□□□□ 0.48
Hoxa3P02831 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxa3P02831 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxa3P02831 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxa3P02831 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxa3P02831 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxa3P02831 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxa3P02831 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxa3P02831 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.02■□□□□ 0.48
Hoxa3P02831 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxa3P02831 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxa3P02831 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxa3P02831 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms