Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TcraP01849 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TcraP01849 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TcraP01849 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TcraP01849 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TcraP01849 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TcraP01849 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TcraP01849 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TcraP01849 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TcraP01849 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TcraP01849 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TcraP01849 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TcraP01849 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TcraP01849 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TcraP01849 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TcraP01849 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TcraP01849 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TcraP01849 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TcraP01849 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TcraP01849 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TcraP01849 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TcraP01849 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TcraP01849 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TcraP01849 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TcraP01849 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TcraP01849 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TcraP01849 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TcraP01849 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TcraP01849 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TcraP01849 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TcraP01849 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TcraP01849 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TcraP01849 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TcraP01849 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TcraP01849 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TcraP01849 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TcraP01849 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TcraP01849 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TcraP01849 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TcraP01849 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TcraP01849 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TcraP01849 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TcraP01849 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TcraP01849 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TcraP01849 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TcraP01849 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TcraP01849 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TcraP01849 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TcraP01849 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TcraP01849 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.75■□□□□ 0.11
TcraP01849 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TcraP01849 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TcraP01849 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TcraP01849 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TcraP01849 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TcraP01849 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.73■□□□□ 0.11
TcraP01849 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TcraP01849 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TcraP01849 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TcraP01849 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TcraP01849 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TcraP01849 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.72■□□□□ 0.11
TcraP01849 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TcraP01849 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TcraP01849 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TcraP01849 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TcraP01849 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TcraP01849 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TcraP01849 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TcraP01849 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TcraP01849 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TcraP01849 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TcraP01849 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TcraP01849 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TcraP01849 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TcraP01849 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TcraP01849 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TcraP01849 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TcraP01849 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TcraP01849 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TcraP01849 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TcraP01849 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TcraP01849 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TcraP01849 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TcraP01849 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.7■□□□□ 0.1
TcraP01849 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TcraP01849 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
TcraP01849 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TcraP01849 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TcraP01849 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TcraP01849 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TcraP01849 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.68■□□□□ 0.1
TcraP01849 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.68■□□□□ 0.1
TcraP01849 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms