Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcd4O89016 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcd4O89016 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcd4O89016 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Abcd4O89016 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.57■□□□□ 0.72
Abcd4O89016 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcd4O89016 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.57■□□□□ 0.72
Abcd4O89016 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcd4O89016 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcd4O89016 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Abcd4O89016 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Abcd4O89016 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Abcd4O89016 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Abcd4O89016 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Abcd4O89016 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Abcd4O89016 Gm43566-201ENSMUST00000196851 808 ntBASIC19.56■□□□□ 0.72
Abcd4O89016 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abcd4O89016 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Abcd4O89016 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcd4O89016 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Abcd4O89016 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcd4O89016 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcd4O89016 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Abcd4O89016 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Abcd4O89016 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcd4O89016 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Abcd4O89016 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Abcd4O89016 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.54■□□□□ 0.72
Abcd4O89016 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcd4O89016 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcd4O89016 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Abcd4O89016 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Abcd4O89016 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcd4O89016 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.53■□□□□ 0.72
Abcd4O89016 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Abcd4O89016 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Abcd4O89016 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Abcd4O89016 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcd4O89016 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcd4O89016 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.52■□□□□ 0.72
Abcd4O89016 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.52■□□□□ 0.72
Abcd4O89016 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcd4O89016 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcd4O89016 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcd4O89016 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcd4O89016 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.52■□□□□ 0.72
Abcd4O89016 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Abcd4O89016 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Abcd4O89016 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcd4O89016 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Abcd4O89016 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcd4O89016 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcd4O89016 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.51■□□□□ 0.71
Abcd4O89016 Gm15820-201ENSMUST00000201566 728 ntBASIC19.51■□□□□ 0.71
Abcd4O89016 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcd4O89016 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.51■□□□□ 0.71
Abcd4O89016 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcd4O89016 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Abcd4O89016 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abcd4O89016 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.5■□□□□ 0.71
Abcd4O89016 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abcd4O89016 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Abcd4O89016 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abcd4O89016 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Abcd4O89016 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcd4O89016 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcd4O89016 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcd4O89016 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.49■□□□□ 0.71
Abcd4O89016 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcd4O89016 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcd4O89016 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Abcd4O89016 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcd4O89016 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcd4O89016 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcd4O89016 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Abcd4O89016 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Abcd4O89016 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.48■□□□□ 0.71
Abcd4O89016 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcd4O89016 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Abcd4O89016 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcd4O89016 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Abcd4O89016 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.47■□□□□ 0.71
Abcd4O89016 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcd4O89016 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Abcd4O89016 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Abcd4O89016 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Abcd4O89016 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcd4O89016 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.46■□□□□ 0.71
Abcd4O89016 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.46■□□□□ 0.71
Abcd4O89016 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcd4O89016 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcd4O89016 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Abcd4O89016 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcd4O89016 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcd4O89016 Gm13238-201ENSMUST00000117655 780 ntBASIC19.45■□□□□ 0.7
Abcd4O89016 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Abcd4O89016 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.45■□□□□ 0.7
Abcd4O89016 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
Abcd4O89016 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.45■□□□□ 0.7
Abcd4O89016 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms