Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac3O88895 Scarna2-201ENSMUST00000157560 414 ntBASIC19.32■□□□□ 0.68
Hdac3O88895 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac3O88895 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac3O88895 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac3O88895 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac3O88895 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac3O88895 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.32■□□□□ 0.68
Hdac3O88895 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac3O88895 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac3O88895 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.31■□□□□ 0.68
Hdac3O88895 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac3O88895 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac3O88895 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac3O88895 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.31■□□□□ 0.68
Hdac3O88895 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac3O88895 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac3O88895 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac3O88895 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.3■□□□□ 0.68
Hdac3O88895 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.3■□□□□ 0.68
Hdac3O88895 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac3O88895 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac3O88895 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac3O88895 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Hdac3O88895 Gm44428-201ENSMUST00000204474 874 ntBASIC19.29■□□□□ 0.68
Hdac3O88895 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hdac3O88895 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac3O88895 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac3O88895 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Hdac3O88895 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac3O88895 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Hdac3O88895 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac3O88895 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Hdac3O88895 Gm11687-201ENSMUST00000118911 886 ntBASIC19.28■□□□□ 0.68
Hdac3O88895 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hdac3O88895 Gm16437-201ENSMUST00000025669 507 ntBASIC19.28■□□□□ 0.68
Hdac3O88895 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hdac3O88895 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Hdac3O88895 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hdac3O88895 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hdac3O88895 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac3O88895 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac3O88895 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hdac3O88895 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac3O88895 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.27■□□□□ 0.67
Hdac3O88895 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.27■□□□□ 0.67
Hdac3O88895 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac3O88895 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hdac3O88895 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac3O88895 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hdac3O88895 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hdac3O88895 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.26■□□□□ 0.67
Hdac3O88895 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac3O88895 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac3O88895 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac3O88895 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
Hdac3O88895 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac3O88895 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac3O88895 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac3O88895 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac3O88895 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hdac3O88895 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac3O88895 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac3O88895 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac3O88895 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac3O88895 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hdac3O88895 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.24■□□□□ 0.67
Hdac3O88895 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.24■□□□□ 0.67
Hdac3O88895 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac3O88895 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac3O88895 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac3O88895 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Hdac3O88895 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.24■□□□□ 0.67
Hdac3O88895 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.24■□□□□ 0.67
Hdac3O88895 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac3O88895 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac3O88895 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac3O88895 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac3O88895 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hdac3O88895 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac3O88895 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac3O88895 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac3O88895 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac3O88895 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hdac3O88895 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac3O88895 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hdac3O88895 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.2■□□□□ 0.66
Hdac3O88895 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.2■□□□□ 0.66
Hdac3O88895 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.2■□□□□ 0.66
Hdac3O88895 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac3O88895 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac3O88895 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac3O88895 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac3O88895 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac3O88895 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.19■□□□□ 0.66
Hdac3O88895 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac3O88895 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac3O88895 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hdac3O88895 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac3O88895 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms