Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
Psmc3O88685 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Psmc3O88685 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Psmc3O88685 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Psmc3O88685 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Psmc3O88685 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Psmc3O88685 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.99■■□□□ 1.27
Psmc3O88685 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.99■■□□□ 1.27
Psmc3O88685 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Psmc3O88685 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Psmc3O88685 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Psmc3O88685 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Psmc3O88685 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Psmc3O88685 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Psmc3O88685 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Psmc3O88685 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Psmc3O88685 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Psmc3O88685 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Psmc3O88685 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Psmc3O88685 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Psmc3O88685 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.97■■□□□ 1.27
Psmc3O88685 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Psmc3O88685 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.97■■□□□ 1.27
Psmc3O88685 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.97■■□□□ 1.27
Psmc3O88685 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.97■■□□□ 1.27
Psmc3O88685 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Psmc3O88685 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Psmc3O88685 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Psmc3O88685 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Psmc3O88685 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Psmc3O88685 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.96■■□□□ 1.27
Psmc3O88685 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Psmc3O88685 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.96■■□□□ 1.27
Psmc3O88685 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Psmc3O88685 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Psmc3O88685 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Psmc3O88685 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Psmc3O88685 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Psmc3O88685 Gm7417-201ENSMUST00000192950 473 ntBASIC22.95■■□□□ 1.26
Psmc3O88685 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Psmc3O88685 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.94■■□□□ 1.26
Psmc3O88685 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.94■■□□□ 1.26
Psmc3O88685 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Psmc3O88685 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Psmc3O88685 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.93■■□□□ 1.26
Psmc3O88685 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Psmc3O88685 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Psmc3O88685 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Psmc3O88685 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Psmc3O88685 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.91■■□□□ 1.26
Psmc3O88685 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Psmc3O88685 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Psmc3O88685 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Psmc3O88685 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Psmc3O88685 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Psmc3O88685 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Psmc3O88685 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.9■■□□□ 1.26
Psmc3O88685 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Psmc3O88685 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Psmc3O88685 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
Psmc3O88685 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Psmc3O88685 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Psmc3O88685 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
Psmc3O88685 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Psmc3O88685 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Psmc3O88685 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Psmc3O88685 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Psmc3O88685 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.88■■□□□ 1.25
Psmc3O88685 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Psmc3O88685 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.88■■□□□ 1.25
Psmc3O88685 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Psmc3O88685 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Psmc3O88685 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Psmc3O88685 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Psmc3O88685 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Psmc3O88685 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Psmc3O88685 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Psmc3O88685 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Psmc3O88685 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Psmc3O88685 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.86■■□□□ 1.25
Psmc3O88685 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Psmc3O88685 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Psmc3O88685 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.86■■□□□ 1.25
Psmc3O88685 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Psmc3O88685 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Psmc3O88685 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Psmc3O88685 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Psmc3O88685 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.84■■□□□ 1.25
Psmc3O88685 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.84■■□□□ 1.25
Psmc3O88685 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Psmc3O88685 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Psmc3O88685 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
Psmc3O88685 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.84■■□□□ 1.25
Psmc3O88685 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Psmc3O88685 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Psmc3O88685 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Psmc3O88685 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Psmc3O88685 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Psmc3O88685 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.83■■□□□ 1.25
Psmc3O88685 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms