Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cops4O88544 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cops4O88544 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cops4O88544 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cops4O88544 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cops4O88544 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cops4O88544 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cops4O88544 Gm9910-201ENSMUST00000195385 1550 ntBASIC20■□□□□ 0.79
Cops4O88544 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops4O88544 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops4O88544 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops4O88544 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops4O88544 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops4O88544 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Cops4O88544 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops4O88544 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops4O88544 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cops4O88544 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cops4O88544 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cops4O88544 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cops4O88544 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cops4O88544 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops4O88544 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops4O88544 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.97■□□□□ 0.79
Cops4O88544 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops4O88544 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops4O88544 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops4O88544 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops4O88544 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops4O88544 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.96■□□□□ 0.79
Cops4O88544 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
Cops4O88544 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops4O88544 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.95■□□□□ 0.78
Cops4O88544 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops4O88544 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops4O88544 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops4O88544 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.95■□□□□ 0.78
Cops4O88544 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.95■□□□□ 0.78
Cops4O88544 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops4O88544 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.95■□□□□ 0.78
Cops4O88544 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cops4O88544 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cops4O88544 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.94■□□□□ 0.78
Cops4O88544 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cops4O88544 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cops4O88544 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Cops4O88544 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cops4O88544 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cops4O88544 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cops4O88544 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Cops4O88544 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.93■□□□□ 0.78
Cops4O88544 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops4O88544 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cops4O88544 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.93■□□□□ 0.78
Cops4O88544 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops4O88544 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cops4O88544 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops4O88544 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops4O88544 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops4O88544 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cops4O88544 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops4O88544 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops4O88544 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cops4O88544 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.92■□□□□ 0.78
Cops4O88544 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Cops4O88544 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops4O88544 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops4O88544 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops4O88544 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Cops4O88544 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops4O88544 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops4O88544 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops4O88544 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.91■□□□□ 0.78
Cops4O88544 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cops4O88544 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops4O88544 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cops4O88544 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops4O88544 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.9■□□□□ 0.78
Cops4O88544 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
Cops4O88544 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cops4O88544 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cops4O88544 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cops4O88544 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cops4O88544 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Cops4O88544 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cops4O88544 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cops4O88544 Notumos-201ENSMUST00000151998 2659 ntBASIC19.89■□□□□ 0.77
Cops4O88544 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cops4O88544 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops4O88544 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops4O88544 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.88■□□□□ 0.77
Cops4O88544 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.88■□□□□ 0.77
Cops4O88544 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.87■□□□□ 0.77
Cops4O88544 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops4O88544 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops4O88544 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops4O88544 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops4O88544 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.87■□□□□ 0.77
Cops4O88544 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops4O88544 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms