Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Golgb1-201ENSMUST00000023534 498 ntBASIC20.55■□□□□ 0.88
Tnfrsf17O88472 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf17O88472 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf17O88472 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf17O88472 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Tnfrsf17O88472 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf17O88472 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf17O88472 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf17O88472 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Tnfrsf17O88472 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tnfrsf17O88472 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf17O88472 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf17O88472 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf17O88472 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
Tnfrsf17O88472 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.52■□□□□ 0.88
Tnfrsf17O88472 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf17O88472 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.52■□□□□ 0.88
Tnfrsf17O88472 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf17O88472 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf17O88472 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf17O88472 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf17O88472 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf17O88472 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf17O88472 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf17O88472 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tnfrsf17O88472 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.5■□□□□ 0.87
Tnfrsf17O88472 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.5■□□□□ 0.87
Tnfrsf17O88472 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf17O88472 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf17O88472 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tnfrsf17O88472 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Tnfrsf17O88472 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf17O88472 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.49■□□□□ 0.87
Tnfrsf17O88472 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf17O88472 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf17O88472 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.48■□□□□ 0.87
Tnfrsf17O88472 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
Tnfrsf17O88472 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.48■□□□□ 0.87
Tnfrsf17O88472 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf17O88472 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.48■□□□□ 0.87
Tnfrsf17O88472 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.48■□□□□ 0.87
Tnfrsf17O88472 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tnfrsf17O88472 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf17O88472 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf17O88472 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Tnfrsf17O88472 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf17O88472 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
Tnfrsf17O88472 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Tnfrsf17O88472 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf17O88472 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.46■□□□□ 0.87
Tnfrsf17O88472 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.46■□□□□ 0.87
Tnfrsf17O88472 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf17O88472 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf17O88472 Gm10399-202ENSMUST00000202768 748 ntBASIC20.45■□□□□ 0.86
Tnfrsf17O88472 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.45■□□□□ 0.86
Tnfrsf17O88472 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf17O88472 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Tnfrsf17O88472 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.45■□□□□ 0.86
Tnfrsf17O88472 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf17O88472 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf17O88472 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.44■□□□□ 0.86
Tnfrsf17O88472 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf17O88472 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Tnfrsf17O88472 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.44■□□□□ 0.86
Tnfrsf17O88472 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.44■□□□□ 0.86
Tnfrsf17O88472 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf17O88472 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Tnfrsf17O88472 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Tnfrsf17O88472 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf17O88472 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.43■□□□□ 0.86
Tnfrsf17O88472 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf17O88472 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
Tnfrsf17O88472 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf17O88472 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf17O88472 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.42■□□□□ 0.86
Tnfrsf17O88472 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf17O88472 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf17O88472 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf17O88472 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.42■□□□□ 0.86
Tnfrsf17O88472 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf17O88472 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.41■□□□□ 0.86
Tnfrsf17O88472 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf17O88472 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.41■□□□□ 0.86
Tnfrsf17O88472 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.4■□□□□ 0.86
Tnfrsf17O88472 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.4■□□□□ 0.86
Tnfrsf17O88472 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf17O88472 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf17O88472 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf17O88472 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tnfrsf17O88472 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf17O88472 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf17O88472 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf17O88472 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf17O88472 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf17O88472 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf17O88472 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf17O88472 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf17O88472 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf17O88472 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.37■□□□□ 0.85
Tnfrsf17O88472 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms