Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
IkbkbO88351 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
IkbkbO88351 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.05■■□□□ 1.44
IkbkbO88351 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
IkbkbO88351 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.05■■□□□ 1.44
IkbkbO88351 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.05■■□□□ 1.44
IkbkbO88351 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
IkbkbO88351 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
IkbkbO88351 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
IkbkbO88351 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IkbkbO88351 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
IkbkbO88351 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.04■■□□□ 1.44
IkbkbO88351 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
IkbkbO88351 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IkbkbO88351 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IkbkbO88351 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.04■■□□□ 1.44
IkbkbO88351 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
IkbkbO88351 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
IkbkbO88351 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
IkbkbO88351 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
IkbkbO88351 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
IkbkbO88351 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
IkbkbO88351 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.02■■□□□ 1.43
IkbkbO88351 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.01■■□□□ 1.43
IkbkbO88351 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
IkbkbO88351 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.01■■□□□ 1.43
IkbkbO88351 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
IkbkbO88351 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
IkbkbO88351 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.01■■□□□ 1.43
IkbkbO88351 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
IkbkbO88351 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
IkbkbO88351 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
IkbkbO88351 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24■■□□□ 1.43
IkbkbO88351 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24■■□□□ 1.43
IkbkbO88351 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
IkbkbO88351 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
IkbkbO88351 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
IkbkbO88351 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
IkbkbO88351 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
IkbkbO88351 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
IkbkbO88351 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.99■■□□□ 1.43
IkbkbO88351 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
IkbkbO88351 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
IkbkbO88351 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
IkbkbO88351 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
IkbkbO88351 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
IkbkbO88351 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
IkbkbO88351 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
IkbkbO88351 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
IkbkbO88351 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
IkbkbO88351 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
IkbkbO88351 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
IkbkbO88351 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
IkbkbO88351 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
IkbkbO88351 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.96■■□□□ 1.43
IkbkbO88351 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
IkbkbO88351 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
IkbkbO88351 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
IkbkbO88351 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
IkbkbO88351 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
IkbkbO88351 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.95■■□□□ 1.42
IkbkbO88351 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
IkbkbO88351 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
IkbkbO88351 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
IkbkbO88351 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.95■■□□□ 1.42
IkbkbO88351 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
IkbkbO88351 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
IkbkbO88351 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
IkbkbO88351 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.94■■□□□ 1.42
IkbkbO88351 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
IkbkbO88351 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
IkbkbO88351 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
IkbkbO88351 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.93■■□□□ 1.42
IkbkbO88351 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.93■■□□□ 1.42
IkbkbO88351 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
IkbkbO88351 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
IkbkbO88351 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
IkbkbO88351 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
IkbkbO88351 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.92■■□□□ 1.42
IkbkbO88351 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
IkbkbO88351 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
IkbkbO88351 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
IkbkbO88351 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IkbkbO88351 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IkbkbO88351 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
IkbkbO88351 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
IkbkbO88351 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
IkbkbO88351 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IkbkbO88351 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
IkbkbO88351 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.89■■□□□ 1.42
IkbkbO88351 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
IkbkbO88351 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
IkbkbO88351 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
IkbkbO88351 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.89■■□□□ 1.41
IkbkbO88351 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
IkbkbO88351 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.41
IkbkbO88351 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
IkbkbO88351 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.88■■□□□ 1.41
IkbkbO88351 Gm5921-201ENSMUST00000075898 882 ntBASIC23.88■■□□□ 1.41
IkbkbO88351 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms