Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx8O35652 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx8O35652 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx8O35652 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lhx8O35652 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx8O35652 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx8O35652 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx8O35652 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx8O35652 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx8O35652 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx8O35652 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx8O35652 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Lhx8O35652 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx8O35652 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx8O35652 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx8O35652 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx8O35652 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx8O35652 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.85■□□□□ 0.93
Lhx8O35652 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.85■□□□□ 0.93
Lhx8O35652 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx8O35652 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx8O35652 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx8O35652 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.85■□□□□ 0.93
Lhx8O35652 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.85■□□□□ 0.93
Lhx8O35652 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx8O35652 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx8O35652 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Lhx8O35652 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Lhx8O35652 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx8O35652 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx8O35652 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx8O35652 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx8O35652 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx8O35652 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Lhx8O35652 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx8O35652 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Lhx8O35652 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx8O35652 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.83■□□□□ 0.92
Lhx8O35652 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lhx8O35652 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Lhx8O35652 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Lhx8O35652 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.82■□□□□ 0.92
Lhx8O35652 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.82■□□□□ 0.92
Lhx8O35652 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.82■□□□□ 0.92
Lhx8O35652 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.82■□□□□ 0.92
Lhx8O35652 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.82■□□□□ 0.92
Lhx8O35652 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.82■□□□□ 0.92
Lhx8O35652 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx8O35652 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Lhx8O35652 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx8O35652 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx8O35652 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx8O35652 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx8O35652 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx8O35652 Gm10420-201ENSMUST00000121713 882 ntBASIC20.81■□□□□ 0.92
Lhx8O35652 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.81■□□□□ 0.92
Lhx8O35652 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx8O35652 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Lhx8O35652 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx8O35652 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx8O35652 Gm15820-201ENSMUST00000201566 728 ntBASIC20.8■□□□□ 0.92
Lhx8O35652 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Lhx8O35652 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.8■□□□□ 0.92
Lhx8O35652 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx8O35652 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx8O35652 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.79■□□□□ 0.92
Lhx8O35652 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx8O35652 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx8O35652 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC20.79■□□□□ 0.92
Lhx8O35652 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx8O35652 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.79■□□□□ 0.92
Lhx8O35652 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx8O35652 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Lhx8O35652 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.78■□□□□ 0.92
Lhx8O35652 Gm45102-201ENSMUST00000207427 857 ntBASIC20.78■□□□□ 0.92
Lhx8O35652 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx8O35652 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Lhx8O35652 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.78■□□□□ 0.92
Lhx8O35652 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx8O35652 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.77■□□□□ 0.91
Lhx8O35652 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx8O35652 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx8O35652 Gm9812-201ENSMUST00000061934 968 ntBASIC20.76■□□□□ 0.91
Lhx8O35652 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.76■□□□□ 0.91
Lhx8O35652 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.76■□□□□ 0.91
Lhx8O35652 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.76■□□□□ 0.91
Lhx8O35652 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.76■□□□□ 0.91
Lhx8O35652 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx8O35652 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lhx8O35652 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.75■□□□□ 0.91
Lhx8O35652 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx8O35652 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lhx8O35652 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.75■□□□□ 0.91
Lhx8O35652 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.75■□□□□ 0.91
Lhx8O35652 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Lhx8O35652 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.74■□□□□ 0.91
Lhx8O35652 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx8O35652 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC20.74■□□□□ 0.91
Lhx8O35652 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx8O35652 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms