Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Abca4O35600 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.22■□□□□ 0.99
Abca4O35600 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.22■□□□□ 0.99
Abca4O35600 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Abca4O35600 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.22■□□□□ 0.99
Abca4O35600 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Abca4O35600 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Abca4O35600 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abca4O35600 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Abca4O35600 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Abca4O35600 Gm26571-201ENSMUST00000181399 666 ntBASIC21.21■□□□□ 0.99
Abca4O35600 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abca4O35600 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abca4O35600 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Abca4O35600 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abca4O35600 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.21■□□□□ 0.99
Abca4O35600 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abca4O35600 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abca4O35600 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abca4O35600 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Abca4O35600 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abca4O35600 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Abca4O35600 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.2■□□□□ 0.98
Abca4O35600 Gm7291-201ENSMUST00000199147 382 ntBASIC21.2■□□□□ 0.98
Abca4O35600 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Abca4O35600 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.2■□□□□ 0.98
Abca4O35600 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Abca4O35600 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.2■□□□□ 0.98
Abca4O35600 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Abca4O35600 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abca4O35600 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.19■□□□□ 0.98
Abca4O35600 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abca4O35600 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Abca4O35600 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Abca4O35600 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Abca4O35600 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Abca4O35600 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Abca4O35600 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abca4O35600 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Abca4O35600 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Abca4O35600 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.16■□□□□ 0.98
Abca4O35600 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Abca4O35600 Gm27405-201ENSMUST00000184201 112 ntBASIC21.15■□□□□ 0.98
Abca4O35600 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Abca4O35600 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Abca4O35600 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Abca4O35600 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Abca4O35600 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Abca4O35600 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abca4O35600 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Abca4O35600 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Abca4O35600 Gm10399-202ENSMUST00000202768 748 ntBASIC21.13■□□□□ 0.97
Abca4O35600 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abca4O35600 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Abca4O35600 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.12■□□□□ 0.97
Abca4O35600 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Abca4O35600 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Abca4O35600 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Abca4O35600 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abca4O35600 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abca4O35600 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Abca4O35600 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abca4O35600 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.11■□□□□ 0.97
Abca4O35600 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.11■□□□□ 0.97
Abca4O35600 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abca4O35600 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Abca4O35600 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.1■□□□□ 0.97
Abca4O35600 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Abca4O35600 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
Abca4O35600 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Abca4O35600 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Abca4O35600 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Abca4O35600 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abca4O35600 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abca4O35600 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Abca4O35600 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.09■□□□□ 0.97
Abca4O35600 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abca4O35600 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Abca4O35600 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Abca4O35600 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Abca4O35600 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Abca4O35600 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Abca4O35600 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Abca4O35600 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Abca4O35600 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abca4O35600 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abca4O35600 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Abca4O35600 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Abca4O35600 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.06■□□□□ 0.96
Abca4O35600 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.06■□□□□ 0.96
Abca4O35600 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.06■□□□□ 0.96
Abca4O35600 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abca4O35600 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Abca4O35600 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Abca4O35600 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abca4O35600 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abca4O35600 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abca4O35600 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abca4O35600 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Abca4O35600 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms