Protein–RNA interactions for Protein: O35516

Notch2, Neurogenic locus notch homolog protein 2, mousemouse

Predictions only

Length 2,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch2O35516 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
Notch2O35516 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Notch2O35516 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Notch2O35516 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Notch2O35516 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.46■□□□□ 0.39
Notch2O35516 Gm10849-201ENSMUST00000100397 618 ntBASIC17.46■□□□□ 0.39
Notch2O35516 Gm40881-201ENSMUST00000223397 166 ntBASIC17.46■□□□□ 0.39
Notch2O35516 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Notch2O35516 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Notch2O35516 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Notch2O35516 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.45■□□□□ 0.38
Notch2O35516 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Notch2O35516 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Notch2O35516 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Notch2O35516 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.44■□□□□ 0.38
Notch2O35516 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.44■□□□□ 0.38
Notch2O35516 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Notch2O35516 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Notch2O35516 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Notch2O35516 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Notch2O35516 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Notch2O35516 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Notch2O35516 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Notch2O35516 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Notch2O35516 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Notch2O35516 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Notch2O35516 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.43■□□□□ 0.38
Notch2O35516 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Notch2O35516 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Notch2O35516 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Notch2O35516 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Notch2O35516 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Notch2O35516 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Notch2O35516 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Notch2O35516 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Notch2O35516 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
Notch2O35516 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Notch2O35516 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.4■□□□□ 0.38
Notch2O35516 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Notch2O35516 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Notch2O35516 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Notch2O35516 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Notch2O35516 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Notch2O35516 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Notch2O35516 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Notch2O35516 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.39■□□□□ 0.37
Notch2O35516 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Notch2O35516 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.39■□□□□ 0.37
Notch2O35516 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.39■□□□□ 0.37
Notch2O35516 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.39■□□□□ 0.37
Notch2O35516 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Notch2O35516 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Notch2O35516 Gm26833-201ENSMUST00000180899 440 ntBASIC17.39■□□□□ 0.37
Notch2O35516 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.38■□□□□ 0.37
Notch2O35516 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Notch2O35516 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Notch2O35516 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Notch2O35516 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Notch2O35516 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Notch2O35516 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.38■□□□□ 0.37
Notch2O35516 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Notch2O35516 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Notch2O35516 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Notch2O35516 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Notch2O35516 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Notch2O35516 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.37■□□□□ 0.37
Notch2O35516 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Notch2O35516 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Notch2O35516 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.37■□□□□ 0.37
Notch2O35516 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.36■□□□□ 0.37
Notch2O35516 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Notch2O35516 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
Notch2O35516 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Notch2O35516 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.35■□□□□ 0.37
Notch2O35516 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Notch2O35516 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.35■□□□□ 0.37
Notch2O35516 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.35■□□□□ 0.37
Notch2O35516 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Notch2O35516 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.35■□□□□ 0.37
Notch2O35516 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Notch2O35516 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Notch2O35516 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Notch2O35516 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Notch2O35516 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Notch2O35516 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Notch2O35516 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Notch2O35516 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Notch2O35516 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.34■□□□□ 0.37
Notch2O35516 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Notch2O35516 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Notch2O35516 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Notch2O35516 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Notch2O35516 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.32■□□□□ 0.36
Notch2O35516 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.32■□□□□ 0.36
Notch2O35516 Gm37179-201ENSMUST00000194862 823 ntBASIC17.32■□□□□ 0.36
Notch2O35516 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Notch2O35516 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Notch2O35516 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.32■□□□□ 0.36
Notch2O35516 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Notch2O35516 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms