Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cx3cl1O35188 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cx3cl1O35188 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cl1O35188 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cl1O35188 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.34■□□□□ 0.85
Cx3cl1O35188 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cx3cl1O35188 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cl1O35188 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.34■□□□□ 0.85
Cx3cl1O35188 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cl1O35188 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cl1O35188 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cx3cl1O35188 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cx3cl1O35188 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cx3cl1O35188 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cx3cl1O35188 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.33■□□□□ 0.84
Cx3cl1O35188 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cx3cl1O35188 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cx3cl1O35188 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cx3cl1O35188 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Cx3cl1O35188 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.32■□□□□ 0.84
Cx3cl1O35188 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cx3cl1O35188 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cx3cl1O35188 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cx3cl1O35188 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cx3cl1O35188 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cx3cl1O35188 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cx3cl1O35188 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cx3cl1O35188 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cx3cl1O35188 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cx3cl1O35188 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cx3cl1O35188 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.3■□□□□ 0.84
Cx3cl1O35188 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cx3cl1O35188 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Cx3cl1O35188 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.29■□□□□ 0.84
Cx3cl1O35188 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cx3cl1O35188 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.29■□□□□ 0.84
Cx3cl1O35188 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.28■□□□□ 0.84
Cx3cl1O35188 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cx3cl1O35188 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.28■□□□□ 0.84
Cx3cl1O35188 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cx3cl1O35188 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cx3cl1O35188 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cx3cl1O35188 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cx3cl1O35188 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cx3cl1O35188 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cx3cl1O35188 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cx3cl1O35188 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cx3cl1O35188 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cx3cl1O35188 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cx3cl1O35188 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
Cx3cl1O35188 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.26■□□□□ 0.83
Cx3cl1O35188 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Cx3cl1O35188 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Cx3cl1O35188 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.25■□□□□ 0.83
Cx3cl1O35188 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cx3cl1O35188 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cx3cl1O35188 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cx3cl1O35188 Gm5921-201ENSMUST00000075898 882 ntBASIC20.24■□□□□ 0.83
Cx3cl1O35188 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.24■□□□□ 0.83
Cx3cl1O35188 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cx3cl1O35188 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cx3cl1O35188 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cx3cl1O35188 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cx3cl1O35188 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cx3cl1O35188 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cx3cl1O35188 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cx3cl1O35188 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cx3cl1O35188 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cx3cl1O35188 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cx3cl1O35188 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cx3cl1O35188 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Cx3cl1O35188 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cl1O35188 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cl1O35188 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.21■□□□□ 0.83
Cx3cl1O35188 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cx3cl1O35188 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cl1O35188 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cl1O35188 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cl1O35188 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 137.2 ms