Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.44■□□□□ 0.7
Alx4O35137 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx4O35137 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Alx4O35137 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx4O35137 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.43■□□□□ 0.7
Alx4O35137 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Alx4O35137 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx4O35137 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx4O35137 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx4O35137 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Alx4O35137 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx4O35137 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Alx4O35137 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.42■□□□□ 0.7
Alx4O35137 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Alx4O35137 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx4O35137 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx4O35137 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx4O35137 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx4O35137 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.42■□□□□ 0.7
Alx4O35137 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx4O35137 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Alx4O35137 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx4O35137 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx4O35137 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Alx4O35137 Gm8503-201ENSMUST00000118131 455 ntBASIC19.41■□□□□ 0.7
Alx4O35137 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Alx4O35137 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx4O35137 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Alx4O35137 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Alx4O35137 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.4■□□□□ 0.7
Alx4O35137 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx4O35137 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.39■□□□□ 0.7
Alx4O35137 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Alx4O35137 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx4O35137 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx4O35137 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Alx4O35137 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Alx4O35137 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.39■□□□□ 0.69
Alx4O35137 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.39■□□□□ 0.69
Alx4O35137 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx4O35137 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Alx4O35137 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.39■□□□□ 0.69
Alx4O35137 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alx4O35137 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Alx4O35137 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Alx4O35137 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Alx4O35137 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.37■□□□□ 0.69
Alx4O35137 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Alx4O35137 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.37■□□□□ 0.69
Alx4O35137 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alx4O35137 Gm45364-201ENSMUST00000210883 159 ntBASIC19.36■□□□□ 0.69
Alx4O35137 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx4O35137 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx4O35137 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.36■□□□□ 0.69
Alx4O35137 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx4O35137 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Alx4O35137 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.35■□□□□ 0.69
Alx4O35137 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx4O35137 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx4O35137 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx4O35137 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx4O35137 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx4O35137 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Alx4O35137 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Alx4O35137 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Alx4O35137 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Alx4O35137 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx4O35137 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx4O35137 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx4O35137 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx4O35137 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx4O35137 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx4O35137 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx4O35137 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Alx4O35137 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Alx4O35137 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Alx4O35137 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.33■□□□□ 0.69
Alx4O35137 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.33■□□□□ 0.68
Alx4O35137 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Alx4O35137 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Alx4O35137 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Alx4O35137 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Alx4O35137 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.32■□□□□ 0.68
Alx4O35137 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Alx4O35137 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Alx4O35137 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alx4O35137 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alx4O35137 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Alx4O35137 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Alx4O35137 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Alx4O35137 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx4O35137 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.31■□□□□ 0.68
Alx4O35137 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx4O35137 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx4O35137 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx4O35137 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx4O35137 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx4O35137 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Alx4O35137 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx4O35137 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms