Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.22■□□□□ 0.99
Atn1O35126 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atn1O35126 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.22■□□□□ 0.99
Atn1O35126 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atn1O35126 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atn1O35126 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.21■□□□□ 0.99
Atn1O35126 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Atn1O35126 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.21■□□□□ 0.99
Atn1O35126 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atn1O35126 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.21■□□□□ 0.99
Atn1O35126 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atn1O35126 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.2■□□□□ 0.98
Atn1O35126 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atn1O35126 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atn1O35126 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atn1O35126 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atn1O35126 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.18■□□□□ 0.98
Atn1O35126 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Atn1O35126 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Atn1O35126 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Atn1O35126 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atn1O35126 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atn1O35126 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atn1O35126 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atn1O35126 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.17■□□□□ 0.98
Atn1O35126 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atn1O35126 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atn1O35126 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atn1O35126 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.16■□□□□ 0.98
Atn1O35126 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Atn1O35126 Gm22567-201ENSMUST00000175542 342 ntBASIC21.16■□□□□ 0.98
Atn1O35126 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.16■□□□□ 0.98
Atn1O35126 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.15■□□□□ 0.98
Atn1O35126 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Atn1O35126 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atn1O35126 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.15■□□□□ 0.98
Atn1O35126 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atn1O35126 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atn1O35126 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atn1O35126 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atn1O35126 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atn1O35126 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atn1O35126 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atn1O35126 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.14■□□□□ 0.97
Atn1O35126 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atn1O35126 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.14■□□□□ 0.97
Atn1O35126 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atn1O35126 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atn1O35126 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Atn1O35126 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.13■□□□□ 0.97
Atn1O35126 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atn1O35126 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atn1O35126 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Atn1O35126 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atn1O35126 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Atn1O35126 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.12■□□□□ 0.97
Atn1O35126 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atn1O35126 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atn1O35126 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atn1O35126 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Atn1O35126 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atn1O35126 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atn1O35126 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atn1O35126 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atn1O35126 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atn1O35126 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.1■□□□□ 0.97
Atn1O35126 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atn1O35126 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Atn1O35126 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atn1O35126 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atn1O35126 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atn1O35126 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atn1O35126 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.09■□□□□ 0.97
Atn1O35126 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.09■□□□□ 0.97
Atn1O35126 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atn1O35126 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atn1O35126 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atn1O35126 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atn1O35126 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.08■□□□□ 0.97
Atn1O35126 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Atn1O35126 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atn1O35126 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atn1O35126 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atn1O35126 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Atn1O35126 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Atn1O35126 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atn1O35126 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Atn1O35126 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atn1O35126 Gm6311-201ENSMUST00000073790 878 ntBASIC21.07■□□□□ 0.96
Atn1O35126 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atn1O35126 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atn1O35126 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atn1O35126 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atn1O35126 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Atn1O35126 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atn1O35126 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atn1O35126 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atn1O35126 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atn1O35126 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atn1O35126 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms