Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufb11O09111 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufb11O09111 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufb11O09111 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufb11O09111 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufb11O09111 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufb11O09111 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ndufb11O09111 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufb11O09111 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufb11O09111 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufb11O09111 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufb11O09111 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Ndufb11O09111 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufb11O09111 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufb11O09111 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufb11O09111 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ndufb11O09111 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ndufb11O09111 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufb11O09111 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufb11O09111 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufb11O09111 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufb11O09111 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ndufb11O09111 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufb11O09111 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufb11O09111 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufb11O09111 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ndufb11O09111 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufb11O09111 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Ndufb11O09111 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufb11O09111 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufb11O09111 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufb11O09111 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ndufb11O09111 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ndufb11O09111 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ndufb11O09111 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Ndufb11O09111 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufb11O09111 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufb11O09111 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.51■□□□□ 0.39
Ndufb11O09111 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ndufb11O09111 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.51■□□□□ 0.39
Ndufb11O09111 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufb11O09111 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ndufb11O09111 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufb11O09111 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufb11O09111 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufb11O09111 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufb11O09111 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufb11O09111 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufb11O09111 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufb11O09111 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufb11O09111 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ndufb11O09111 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ndufb11O09111 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndufb11O09111 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndufb11O09111 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Ndufb11O09111 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufb11O09111 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufb11O09111 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ndufb11O09111 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ndufb11O09111 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufb11O09111 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufb11O09111 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufb11O09111 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufb11O09111 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufb11O09111 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufb11O09111 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufb11O09111 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ndufb11O09111 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.47■□□□□ 0.39
Ndufb11O09111 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufb11O09111 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufb11O09111 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufb11O09111 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ndufb11O09111 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufb11O09111 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.45■□□□□ 0.38
Ndufb11O09111 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ndufb11O09111 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufb11O09111 Gm27322-201ENSMUST00000184007 104 ntBASIC17.45■□□□□ 0.38
Ndufb11O09111 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.45■□□□□ 0.38
Ndufb11O09111 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.45■□□□□ 0.38
Ndufb11O09111 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufb11O09111 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ndufb11O09111 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndufb11O09111 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ndufb11O09111 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndufb11O09111 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ndufb11O09111 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ndufb11O09111 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ndufb11O09111 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ndufb11O09111 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndufb11O09111 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ndufb11O09111 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndufb11O09111 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufb11O09111 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufb11O09111 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufb11O09111 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ndufb11O09111 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ndufb11O09111 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufb11O09111 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufb11O09111 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndufb11O09111 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms