Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm37415-201ENSMUST00000192265 2054 ntBASIC26.1■■□□□ 1.77
Hdac1O09106 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Hdac1O09106 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Hdac1O09106 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.09■■□□□ 1.77
Hdac1O09106 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Hdac1O09106 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.09■■□□□ 1.77
Hdac1O09106 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Hdac1O09106 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Hdac1O09106 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Hdac1O09106 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Hdac1O09106 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Hdac1O09106 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
Hdac1O09106 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.07■■□□□ 1.76
Hdac1O09106 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Hdac1O09106 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Hdac1O09106 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC26.06■■□□□ 1.76
Hdac1O09106 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hdac1O09106 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hdac1O09106 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Hdac1O09106 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hdac1O09106 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Hdac1O09106 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.04■■□□□ 1.76
Hdac1O09106 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Hdac1O09106 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Hdac1O09106 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Hdac1O09106 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.04■■□□□ 1.76
Hdac1O09106 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Hdac1O09106 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Hdac1O09106 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Hdac1O09106 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.03■■□□□ 1.76
Hdac1O09106 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Hdac1O09106 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
Hdac1O09106 Gm7432-201ENSMUST00000210343 879 ntBASIC26.01■■□□□ 1.75
Hdac1O09106 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Hdac1O09106 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Hdac1O09106 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC26■■□□□ 1.75
Hdac1O09106 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Hdac1O09106 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.99■■□□□ 1.75
Hdac1O09106 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Hdac1O09106 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Hdac1O09106 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Hdac1O09106 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.98■■□□□ 1.75
Hdac1O09106 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Hdac1O09106 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Hdac1O09106 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Hdac1O09106 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Hdac1O09106 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Hdac1O09106 Gm11599-201ENSMUST00000118720 878 ntBASIC25.97■■□□□ 1.75
Hdac1O09106 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Hdac1O09106 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Hdac1O09106 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.97■■□□□ 1.75
Hdac1O09106 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Hdac1O09106 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Hdac1O09106 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
Hdac1O09106 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Hdac1O09106 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.95■■□□□ 1.74
Hdac1O09106 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.95■■□□□ 1.74
Hdac1O09106 Gm42418-201ENSMUST00000182010 1831 ntBASIC25.95■■□□□ 1.74
Hdac1O09106 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Hdac1O09106 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Hdac1O09106 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Hdac1O09106 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
Hdac1O09106 Gm12504-201ENSMUST00000120860 2231 ntBASIC25.94■■□□□ 1.74
Hdac1O09106 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Hdac1O09106 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hdac1O09106 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC25.93■■□□□ 1.74
Hdac1O09106 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Hdac1O09106 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hdac1O09106 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Hdac1O09106 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.92■■□□□ 1.74
Hdac1O09106 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.92■■□□□ 1.74
Hdac1O09106 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Hdac1O09106 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hdac1O09106 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Hdac1O09106 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Hdac1O09106 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Hdac1O09106 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Hdac1O09106 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Hdac1O09106 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Hdac1O09106 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Hdac1O09106 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
Hdac1O09106 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Hdac1O09106 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Hdac1O09106 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.9■■□□□ 1.74
Hdac1O09106 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Hdac1O09106 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Hdac1O09106 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Hdac1O09106 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.89■■□□□ 1.74
Hdac1O09106 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Hdac1O09106 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Hdac1O09106 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Hdac1O09106 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Hdac1O09106 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Hdac1O09106 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Hdac1O09106 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hdac1O09106 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
Hdac1O09106 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hdac1O09106 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hdac1O09106 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hdac1O09106 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms