Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Mir6538-201ENSMUST00000183713 110 ntBASIC19.27■□□□□ 0.68
Raet1bO08603 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1bO08603 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Raet1bO08603 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.26■□□□□ 0.67
Raet1bO08603 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raet1bO08603 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Raet1bO08603 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.25■□□□□ 0.67
Raet1bO08603 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Raet1bO08603 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1bO08603 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Raet1bO08603 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.25■□□□□ 0.67
Raet1bO08603 Gm14523-201ENSMUST00000117260 558 ntBASIC19.25■□□□□ 0.67
Raet1bO08603 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Raet1bO08603 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Raet1bO08603 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1bO08603 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1bO08603 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1bO08603 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1bO08603 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1bO08603 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1bO08603 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1bO08603 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1bO08603 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1bO08603 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1bO08603 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.23■□□□□ 0.67
Raet1bO08603 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1bO08603 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1bO08603 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1bO08603 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1bO08603 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.23■□□□□ 0.67
Raet1bO08603 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1bO08603 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1bO08603 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1bO08603 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Raet1bO08603 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.23■□□□□ 0.67
Raet1bO08603 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Raet1bO08603 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.22■□□□□ 0.67
Raet1bO08603 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1bO08603 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Raet1bO08603 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.22■□□□□ 0.67
Raet1bO08603 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.22■□□□□ 0.67
Raet1bO08603 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1bO08603 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1bO08603 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1bO08603 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raet1bO08603 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Raet1bO08603 Gm7332-201ENSMUST00000118351 454 ntBASIC19.21■□□□□ 0.67
Raet1bO08603 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.21■□□□□ 0.67
Raet1bO08603 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raet1bO08603 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raet1bO08603 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1bO08603 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1bO08603 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1bO08603 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1bO08603 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Raet1bO08603 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.2■□□□□ 0.66
Raet1bO08603 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1bO08603 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1bO08603 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1bO08603 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1bO08603 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1bO08603 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1bO08603 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1bO08603 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1bO08603 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1bO08603 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1bO08603 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.19■□□□□ 0.66
Raet1bO08603 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1bO08603 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.19■□□□□ 0.66
Raet1bO08603 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1bO08603 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1bO08603 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1bO08603 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Raet1bO08603 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raet1bO08603 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Raet1bO08603 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.17■□□□□ 0.66
Raet1bO08603 Gm12366-201ENSMUST00000121722 873 ntBASIC19.17■□□□□ 0.66
Raet1bO08603 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.17■□□□□ 0.66
Raet1bO08603 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Raet1bO08603 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.17■□□□□ 0.66
Raet1bO08603 Gm5786-201ENSMUST00000085368 882 ntBASIC19.17■□□□□ 0.66
Raet1bO08603 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raet1bO08603 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raet1bO08603 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.16■□□□□ 0.66
Raet1bO08603 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1bO08603 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raet1bO08603 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.15■□□□□ 0.66
Raet1bO08603 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.15■□□□□ 0.66
Raet1bO08603 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raet1bO08603 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Raet1bO08603 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms