Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC31.21■■■□□ 2.59
Scaf11E9PZM7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Scaf11E9PZM7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Scaf11E9PZM7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Scaf11E9PZM7 Gm18284-201ENSMUST00000172604 624 ntBASIC31.21■■■□□ 2.59
Scaf11E9PZM7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Scaf11E9PZM7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Scaf11E9PZM7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
Scaf11E9PZM7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Scaf11E9PZM7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Scaf11E9PZM7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Scaf11E9PZM7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Scaf11E9PZM7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC31.18■■■□□ 2.58
Scaf11E9PZM7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC31.18■■■□□ 2.58
Scaf11E9PZM7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
Scaf11E9PZM7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Scaf11E9PZM7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Scaf11E9PZM7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
Scaf11E9PZM7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Scaf11E9PZM7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Scaf11E9PZM7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Scaf11E9PZM7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Scaf11E9PZM7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Scaf11E9PZM7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC31.17■■■□□ 2.58
Scaf11E9PZM7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC31.16■■■□□ 2.58
Scaf11E9PZM7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC31.16■■■□□ 2.58
Scaf11E9PZM7 Gm28536-201ENSMUST00000190971 1317 ntBASIC31.16■■■□□ 2.58
Scaf11E9PZM7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Scaf11E9PZM7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Scaf11E9PZM7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Scaf11E9PZM7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Scaf11E9PZM7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Scaf11E9PZM7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Scaf11E9PZM7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC31.14■■■□□ 2.58
Scaf11E9PZM7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Scaf11E9PZM7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Scaf11E9PZM7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Scaf11E9PZM7 Golgb1-201ENSMUST00000023534 498 ntBASIC31.14■■■□□ 2.57
Scaf11E9PZM7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC31.13■■■□□ 2.57
Scaf11E9PZM7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Scaf11E9PZM7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC31.12■■■□□ 2.57
Scaf11E9PZM7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Scaf11E9PZM7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC31.12■■■□□ 2.57
Scaf11E9PZM7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
Scaf11E9PZM7 Gm29257-201ENSMUST00000186115 639 ntBASIC31.11■■■□□ 2.57
Scaf11E9PZM7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Scaf11E9PZM7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Scaf11E9PZM7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC31.1■■■□□ 2.57
Scaf11E9PZM7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC31.1■■■□□ 2.57
Scaf11E9PZM7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Scaf11E9PZM7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Scaf11E9PZM7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Scaf11E9PZM7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Scaf11E9PZM7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Scaf11E9PZM7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Scaf11E9PZM7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
Scaf11E9PZM7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Scaf11E9PZM7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Scaf11E9PZM7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Scaf11E9PZM7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Scaf11E9PZM7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Scaf11E9PZM7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC31.07■■■□□ 2.56
Scaf11E9PZM7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Scaf11E9PZM7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Scaf11E9PZM7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Scaf11E9PZM7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Scaf11E9PZM7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Scaf11E9PZM7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC31.05■■■□□ 2.56
Scaf11E9PZM7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC31.04■■■□□ 2.56
Scaf11E9PZM7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC31.04■■■□□ 2.56
Scaf11E9PZM7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Scaf11E9PZM7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Scaf11E9PZM7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Scaf11E9PZM7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Scaf11E9PZM7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Scaf11E9PZM7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
Scaf11E9PZM7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Scaf11E9PZM7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Scaf11E9PZM7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC31.01■■■□□ 2.56
Scaf11E9PZM7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Scaf11E9PZM7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Scaf11E9PZM7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC31.01■■■□□ 2.56
Scaf11E9PZM7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
Scaf11E9PZM7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Scaf11E9PZM7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC31■■■□□ 2.55
Scaf11E9PZM7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Scaf11E9PZM7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC30.99■■■□□ 2.55
Scaf11E9PZM7 Gm10399-202ENSMUST00000202768 748 ntBASIC30.99■■■□□ 2.55
Scaf11E9PZM7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
Scaf11E9PZM7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Scaf11E9PZM7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC30.98■■■□□ 2.55
Scaf11E9PZM7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Scaf11E9PZM7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Scaf11E9PZM7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
Scaf11E9PZM7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Scaf11E9PZM7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Scaf11E9PZM7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Scaf11E9PZM7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC30.96■■■□□ 2.55
Scaf11E9PZM7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Scaf11E9PZM7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms