Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccnb1ip1D3Z3K2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ccnb1ip1D3Z3K2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccnb1ip1D3Z3K2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccnb1ip1D3Z3K2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccnb1ip1D3Z3K2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccnb1ip1D3Z3K2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ccnb1ip1D3Z3K2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccnb1ip1D3Z3K2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccnb1ip1D3Z3K2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.73■□□□□ 0.75
Ccnb1ip1D3Z3K2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccnb1ip1D3Z3K2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccnb1ip1D3Z3K2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccnb1ip1D3Z3K2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccnb1ip1D3Z3K2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccnb1ip1D3Z3K2 Gm16148-201ENSMUST00000119653 893 ntBASIC19.72■□□□□ 0.75
Ccnb1ip1D3Z3K2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccnb1ip1D3Z3K2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccnb1ip1D3Z3K2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccnb1ip1D3Z3K2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccnb1ip1D3Z3K2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccnb1ip1D3Z3K2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccnb1ip1D3Z3K2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Ccnb1ip1D3Z3K2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccnb1ip1D3Z3K2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Ccnb1ip1D3Z3K2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccnb1ip1D3Z3K2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccnb1ip1D3Z3K2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccnb1ip1D3Z3K2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccnb1ip1D3Z3K2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccnb1ip1D3Z3K2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccnb1ip1D3Z3K2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccnb1ip1D3Z3K2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ccnb1ip1D3Z3K2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccnb1ip1D3Z3K2 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.67■□□□□ 0.74
Ccnb1ip1D3Z3K2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.67■□□□□ 0.74
Ccnb1ip1D3Z3K2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccnb1ip1D3Z3K2 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.66■□□□□ 0.74
Ccnb1ip1D3Z3K2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccnb1ip1D3Z3K2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccnb1ip1D3Z3K2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccnb1ip1D3Z3K2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccnb1ip1D3Z3K2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccnb1ip1D3Z3K2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccnb1ip1D3Z3K2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccnb1ip1D3Z3K2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Ccnb1ip1D3Z3K2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ccnb1ip1D3Z3K2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccnb1ip1D3Z3K2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Ccnb1ip1D3Z3K2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccnb1ip1D3Z3K2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccnb1ip1D3Z3K2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.64■□□□□ 0.73
Ccnb1ip1D3Z3K2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccnb1ip1D3Z3K2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ccnb1ip1D3Z3K2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccnb1ip1D3Z3K2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccnb1ip1D3Z3K2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccnb1ip1D3Z3K2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccnb1ip1D3Z3K2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccnb1ip1D3Z3K2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccnb1ip1D3Z3K2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccnb1ip1D3Z3K2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccnb1ip1D3Z3K2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccnb1ip1D3Z3K2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ccnb1ip1D3Z3K2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccnb1ip1D3Z3K2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccnb1ip1D3Z3K2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccnb1ip1D3Z3K2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccnb1ip1D3Z3K2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccnb1ip1D3Z3K2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccnb1ip1D3Z3K2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccnb1ip1D3Z3K2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccnb1ip1D3Z3K2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccnb1ip1D3Z3K2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccnb1ip1D3Z3K2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ccnb1ip1D3Z3K2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccnb1ip1D3Z3K2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccnb1ip1D3Z3K2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccnb1ip1D3Z3K2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccnb1ip1D3Z3K2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccnb1ip1D3Z3K2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms