Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.66■■□□□ 1.38
Ptchd4B9EKX1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.66■■□□□ 1.38
Ptchd4B9EKX1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ptchd4B9EKX1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptchd4B9EKX1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptchd4B9EKX1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ptchd4B9EKX1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptchd4B9EKX1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptchd4B9EKX1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptchd4B9EKX1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptchd4B9EKX1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.65■■□□□ 1.38
Ptchd4B9EKX1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ptchd4B9EKX1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ptchd4B9EKX1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.64■■□□□ 1.37
Ptchd4B9EKX1 Etf1-202ENSMUST00000180351 108 ntBASIC23.64■■□□□ 1.37
Ptchd4B9EKX1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptchd4B9EKX1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptchd4B9EKX1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptchd4B9EKX1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptchd4B9EKX1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Ptchd4B9EKX1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Ptchd4B9EKX1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptchd4B9EKX1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptchd4B9EKX1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.63■■□□□ 1.37
Ptchd4B9EKX1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.63■■□□□ 1.37
Ptchd4B9EKX1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptchd4B9EKX1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptchd4B9EKX1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Ptchd4B9EKX1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptchd4B9EKX1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptchd4B9EKX1 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.6■■□□□ 1.37
Ptchd4B9EKX1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Ptchd4B9EKX1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ptchd4B9EKX1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptchd4B9EKX1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.59■■□□□ 1.37
Ptchd4B9EKX1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptchd4B9EKX1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptchd4B9EKX1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.58■■□□□ 1.37
Ptchd4B9EKX1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.58■■□□□ 1.37
Ptchd4B9EKX1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ptchd4B9EKX1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ptchd4B9EKX1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ptchd4B9EKX1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ptchd4B9EKX1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptchd4B9EKX1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.57■■□□□ 1.36
Ptchd4B9EKX1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ptchd4B9EKX1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptchd4B9EKX1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptchd4B9EKX1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.56■■□□□ 1.36
Ptchd4B9EKX1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptchd4B9EKX1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.55■■□□□ 1.36
Ptchd4B9EKX1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.55■■□□□ 1.36
Ptchd4B9EKX1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptchd4B9EKX1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptchd4B9EKX1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptchd4B9EKX1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptchd4B9EKX1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptchd4B9EKX1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.53■■□□□ 1.36
Ptchd4B9EKX1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ptchd4B9EKX1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ptchd4B9EKX1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptchd4B9EKX1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.52■■□□□ 1.36
Ptchd4B9EKX1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.52■■□□□ 1.36
Ptchd4B9EKX1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptchd4B9EKX1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptchd4B9EKX1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ptchd4B9EKX1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.52■■□□□ 1.36
Ptchd4B9EKX1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ptchd4B9EKX1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ptchd4B9EKX1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Ptchd4B9EKX1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ptchd4B9EKX1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ptchd4B9EKX1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ptchd4B9EKX1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ptchd4B9EKX1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 Gm15039-201ENSMUST00000118914 875 ntBASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.49■■□□□ 1.35
Ptchd4B9EKX1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ptchd4B9EKX1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.48■■□□□ 1.35
Ptchd4B9EKX1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.48■■□□□ 1.35
Ptchd4B9EKX1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms