Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12d-1A0N8R0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.52■□□□□ 0.39
Trav12d-1A0N8R0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12d-1A0N8R0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12d-1A0N8R0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12d-1A0N8R0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.51■□□□□ 0.39
Trav12d-1A0N8R0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12d-1A0N8R0 Terc-201ENSMUST00000082862 423 ntBASIC17.51■□□□□ 0.39
Trav12d-1A0N8R0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12d-1A0N8R0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12d-1A0N8R0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Trav12d-1A0N8R0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12d-1A0N8R0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12d-1A0N8R0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12d-1A0N8R0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12d-1A0N8R0 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.5■□□□□ 0.39
Trav12d-1A0N8R0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav12d-1A0N8R0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 Gm8503-201ENSMUST00000118131 455 ntBASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav12d-1A0N8R0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-1A0N8R0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav12d-1A0N8R0 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.48■□□□□ 0.39
Trav12d-1A0N8R0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-1A0N8R0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-1A0N8R0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-1A0N8R0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-1A0N8R0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-1A0N8R0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-1A0N8R0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12d-1A0N8R0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav12d-1A0N8R0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-1A0N8R0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav12d-1A0N8R0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-1A0N8R0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-1A0N8R0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-1A0N8R0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-1A0N8R0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav12d-1A0N8R0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12d-1A0N8R0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12d-1A0N8R0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12d-1A0N8R0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav12d-1A0N8R0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trav12d-1A0N8R0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12d-1A0N8R0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12d-1A0N8R0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Trav12d-1A0N8R0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12d-1A0N8R0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav12d-1A0N8R0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12d-1A0N8R0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12d-1A0N8R0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav12d-1A0N8R0 Gm45364-201ENSMUST00000210883 159 ntBASIC17.44■□□□□ 0.38
Trav12d-1A0N8R0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12d-1A0N8R0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12d-1A0N8R0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav12d-1A0N8R0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav12d-1A0N8R0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav12d-1A0N8R0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12d-1A0N8R0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12d-1A0N8R0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12d-1A0N8R0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12d-1A0N8R0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12d-1A0N8R0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav12d-1A0N8R0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12d-1A0N8R0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12d-1A0N8R0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav12d-1A0N8R0 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.42■□□□□ 0.38
Trav12d-1A0N8R0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav12d-1A0N8R0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12d-1A0N8R0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12d-1A0N8R0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms