Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-3A0A140T8Q0 Gm6277-202ENSMUST00000224036 2779 ntBASIC13.14□□□□□ -0.31
Igkv3-3A0A140T8Q0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-3A0A140T8Q0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-3A0A140T8Q0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Igkv3-3A0A140T8Q0 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC13.11□□□□□ -0.31
Igkv3-3A0A140T8Q0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 Tdp2-203ENSMUST00000223804 1136 ntBASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-3A0A140T8Q0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Igkv3-3A0A140T8Q0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC13.08□□□□□ -0.31
Igkv3-3A0A140T8Q0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Igkv3-3A0A140T8Q0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Igkv3-3A0A140T8Q0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-3A0A140T8Q0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Gm24970-201ENSMUST00000175582 82 ntBASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-3A0A140T8Q0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Igkv3-3A0A140T8Q0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-3A0A140T8Q0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms