Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm5921-201ENSMUST00000075898 882 ntBASIC15.66■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav13n-1A0A0G2JEU8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
Trav13n-1A0A0G2JEU8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-1A0A0G2JEU8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13n-1A0A0G2JEU8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.55■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms