Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BC053393A0A0B4J1F6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BC053393A0A0B4J1F6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BC053393A0A0B4J1F6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BC053393A0A0B4J1F6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.34■□□□□ 0.37
BC053393A0A0B4J1F6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.34■□□□□ 0.37
BC053393A0A0B4J1F6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.34■□□□□ 0.37
BC053393A0A0B4J1F6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BC053393A0A0B4J1F6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BC053393A0A0B4J1F6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BC053393A0A0B4J1F6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
BC053393A0A0B4J1F6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BC053393A0A0B4J1F6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BC053393A0A0B4J1F6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BC053393A0A0B4J1F6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BC053393A0A0B4J1F6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BC053393A0A0B4J1F6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BC053393A0A0B4J1F6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
BC053393A0A0B4J1F6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BC053393A0A0B4J1F6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BC053393A0A0B4J1F6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BC053393A0A0B4J1F6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BC053393A0A0B4J1F6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
BC053393A0A0B4J1F6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC053393A0A0B4J1F6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC053393A0A0B4J1F6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BC053393A0A0B4J1F6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC053393A0A0B4J1F6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC053393A0A0B4J1F6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC053393A0A0B4J1F6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC053393A0A0B4J1F6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BC053393A0A0B4J1F6 Gm11599-201ENSMUST00000118720 878 ntBASIC17.3■□□□□ 0.36
BC053393A0A0B4J1F6 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.3■□□□□ 0.36
BC053393A0A0B4J1F6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC053393A0A0B4J1F6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BC053393A0A0B4J1F6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BC053393A0A0B4J1F6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC053393A0A0B4J1F6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC053393A0A0B4J1F6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.29■□□□□ 0.36
BC053393A0A0B4J1F6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.29■□□□□ 0.36
BC053393A0A0B4J1F6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
BC053393A0A0B4J1F6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC053393A0A0B4J1F6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC053393A0A0B4J1F6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC053393A0A0B4J1F6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.28■□□□□ 0.36
BC053393A0A0B4J1F6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC053393A0A0B4J1F6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC053393A0A0B4J1F6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC053393A0A0B4J1F6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC053393A0A0B4J1F6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC053393A0A0B4J1F6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
BC053393A0A0B4J1F6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
BC053393A0A0B4J1F6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BC053393A0A0B4J1F6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.27■□□□□ 0.35
BC053393A0A0B4J1F6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC053393A0A0B4J1F6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BC053393A0A0B4J1F6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC053393A0A0B4J1F6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC053393A0A0B4J1F6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BC053393A0A0B4J1F6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC053393A0A0B4J1F6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC053393A0A0B4J1F6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BC053393A0A0B4J1F6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BC053393A0A0B4J1F6 Notumos-201ENSMUST00000151998 2659 ntBASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC053393A0A0B4J1F6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC053393A0A0B4J1F6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
BC053393A0A0B4J1F6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC053393A0A0B4J1F6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC053393A0A0B4J1F6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC053393A0A0B4J1F6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC053393A0A0B4J1F6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
BC053393A0A0B4J1F6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
BC053393A0A0B4J1F6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
BC053393A0A0B4J1F6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BC053393A0A0B4J1F6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.23■□□□□ 0.35
BC053393A0A0B4J1F6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BC053393A0A0B4J1F6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BC053393A0A0B4J1F6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC053393A0A0B4J1F6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC053393A0A0B4J1F6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC053393A0A0B4J1F6 Gm22567-201ENSMUST00000175542 342 ntBASIC17.22■□□□□ 0.35
BC053393A0A0B4J1F6 Mir3960-201ENSMUST00000198213 73 ntBASIC17.22■□□□□ 0.35
BC053393A0A0B4J1F6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC053393A0A0B4J1F6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC053393A0A0B4J1F6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC053393A0A0B4J1F6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC053393A0A0B4J1F6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC053393A0A0B4J1F6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
BC053393A0A0B4J1F6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms