Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.96■□□□□ 0.79
Trbc1A0A0A6YWV4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbc1A0A0A6YWV4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trbc1A0A0A6YWV4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Trbc1A0A0A6YWV4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbc1A0A0A6YWV4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbc1A0A0A6YWV4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trbc1A0A0A6YWV4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trbc1A0A0A6YWV4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbc1A0A0A6YWV4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Trbc1A0A0A6YWV4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbc1A0A0A6YWV4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.95■□□□□ 0.78
Trbc1A0A0A6YWV4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trbc1A0A0A6YWV4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbc1A0A0A6YWV4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trbc1A0A0A6YWV4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trbc1A0A0A6YWV4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbc1A0A0A6YWV4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbc1A0A0A6YWV4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trbc1A0A0A6YWV4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.93■□□□□ 0.78
Trbc1A0A0A6YWV4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trbc1A0A0A6YWV4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbc1A0A0A6YWV4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbc1A0A0A6YWV4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbc1A0A0A6YWV4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trbc1A0A0A6YWV4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbc1A0A0A6YWV4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trbc1A0A0A6YWV4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trbc1A0A0A6YWV4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbc1A0A0A6YWV4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.92■□□□□ 0.78
Trbc1A0A0A6YWV4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trbc1A0A0A6YWV4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbc1A0A0A6YWV4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trbc1A0A0A6YWV4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbc1A0A0A6YWV4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trbc1A0A0A6YWV4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbc1A0A0A6YWV4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.91■□□□□ 0.78
Trbc1A0A0A6YWV4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbc1A0A0A6YWV4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbc1A0A0A6YWV4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbc1A0A0A6YWV4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trbc1A0A0A6YWV4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trbc1A0A0A6YWV4 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.9■□□□□ 0.78
Trbc1A0A0A6YWV4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbc1A0A0A6YWV4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbc1A0A0A6YWV4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.9■□□□□ 0.78
Trbc1A0A0A6YWV4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trbc1A0A0A6YWV4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trbc1A0A0A6YWV4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbc1A0A0A6YWV4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbc1A0A0A6YWV4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbc1A0A0A6YWV4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Trbc1A0A0A6YWV4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trbc1A0A0A6YWV4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trbc1A0A0A6YWV4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trbc1A0A0A6YWV4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trbc1A0A0A6YWV4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trbc1A0A0A6YWV4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbc1A0A0A6YWV4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trbc1A0A0A6YWV4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trbc1A0A0A6YWV4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbc1A0A0A6YWV4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbc1A0A0A6YWV4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbc1A0A0A6YWV4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trbc1A0A0A6YWV4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbc1A0A0A6YWV4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbc1A0A0A6YWV4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbc1A0A0A6YWV4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbc1A0A0A6YWV4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trbc1A0A0A6YWV4 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.84■□□□□ 0.77
Trbc1A0A0A6YWV4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbc1A0A0A6YWV4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trbc1A0A0A6YWV4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbc1A0A0A6YWV4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
Trbc1A0A0A6YWV4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trbc1A0A0A6YWV4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trbc1A0A0A6YWV4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trbc1A0A0A6YWV4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trbc1A0A0A6YWV4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trbc1A0A0A6YWV4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbc1A0A0A6YWV4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbc1A0A0A6YWV4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms