Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-3A0A075B648 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav12-3A0A075B648 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-3A0A075B648 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-3A0A075B648 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trav12-3A0A075B648 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-3A0A075B648 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-3A0A075B648 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-3A0A075B648 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-3A0A075B648 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-3A0A075B648 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav12-3A0A075B648 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-3A0A075B648 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-3A0A075B648 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav12-3A0A075B648 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-3A0A075B648 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-3A0A075B648 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-3A0A075B648 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-3A0A075B648 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-3A0A075B648 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-3A0A075B648 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav12-3A0A075B648 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-3A0A075B648 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-3A0A075B648 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-3A0A075B648 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-3A0A075B648 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav12-3A0A075B648 Gm27322-201ENSMUST00000184007 104 ntBASIC15.95■□□□□ 0.14
Trav12-3A0A075B648 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav12-3A0A075B648 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-3A0A075B648 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-3A0A075B648 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12-3A0A075B648 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12-3A0A075B648 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12-3A0A075B648 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.94■□□□□ 0.14
Trav12-3A0A075B648 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12-3A0A075B648 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12-3A0A075B648 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav12-3A0A075B648 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav12-3A0A075B648 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12-3A0A075B648 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12-3A0A075B648 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav12-3A0A075B648 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.93■□□□□ 0.14
Trav12-3A0A075B648 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12-3A0A075B648 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12-3A0A075B648 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Trav12-3A0A075B648 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.93■□□□□ 0.14
Trav12-3A0A075B648 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12-3A0A075B648 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12-3A0A075B648 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12-3A0A075B648 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12-3A0A075B648 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav12-3A0A075B648 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Trav12-3A0A075B648 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12-3A0A075B648 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav12-3A0A075B648 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12-3A0A075B648 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12-3A0A075B648 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12-3A0A075B648 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12-3A0A075B648 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav12-3A0A075B648 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Trav12-3A0A075B648 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12-3A0A075B648 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12-3A0A075B648 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12-3A0A075B648 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12-3A0A075B648 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav12-3A0A075B648 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12-3A0A075B648 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12-3A0A075B648 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.89■□□□□ 0.13
Trav12-3A0A075B648 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12-3A0A075B648 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Trav12-3A0A075B648 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12-3A0A075B648 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.88■□□□□ 0.13
Trav12-3A0A075B648 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav12-3A0A075B648 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-3A0A075B648 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-3A0A075B648 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-3A0A075B648 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav12-3A0A075B648 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-3A0A075B648 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-3A0A075B648 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-3A0A075B648 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-3A0A075B648 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-3A0A075B648 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav12-3A0A075B648 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-3A0A075B648 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav12-3A0A075B648 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-3A0A075B648 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-3A0A075B648 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav12-3A0A075B648 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav12-3A0A075B648 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-3A0A075B648 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-3A0A075B648 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-3A0A075B648 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.86■□□□□ 0.13
Trav12-3A0A075B648 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav12-3A0A075B648 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-3A0A075B648 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-3A0A075B648 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav12-3A0A075B648 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-3A0A075B648 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-3A0A075B648 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms