Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4n-4A0A075B615 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4n-4A0A075B615 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4n-4A0A075B615 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4n-4A0A075B615 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4n-4A0A075B615 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4n-4A0A075B615 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4n-4A0A075B615 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4n-4A0A075B615 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Trav4n-4A0A075B615 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4n-4A0A075B615 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
Trav4n-4A0A075B615 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4n-4A0A075B615 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4n-4A0A075B615 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4n-4A0A075B615 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4n-4A0A075B615 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav4n-4A0A075B615 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4n-4A0A075B615 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav4n-4A0A075B615 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4n-4A0A075B615 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4n-4A0A075B615 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4n-4A0A075B615 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav4n-4A0A075B615 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4n-4A0A075B615 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4n-4A0A075B615 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4n-4A0A075B615 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4n-4A0A075B615 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4n-4A0A075B615 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav4n-4A0A075B615 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav4n-4A0A075B615 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4n-4A0A075B615 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4n-4A0A075B615 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav4n-4A0A075B615 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4n-4A0A075B615 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4n-4A0A075B615 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4n-4A0A075B615 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 Gm30023-201ENSMUST00000197970 889 ntBASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav4n-4A0A075B615 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav4n-4A0A075B615 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.09■□□□□ 0.01
Trav4n-4A0A075B615 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav4n-4A0A075B615 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4n-4A0A075B615 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4n-4A0A075B615 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4n-4A0A075B615 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4n-4A0A075B615 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4n-4A0A075B615 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4n-4A0A075B615 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4n-4A0A075B615 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4n-4A0A075B615 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav4n-4A0A075B615 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav4n-4A0A075B615 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav4n-4A0A075B615 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav4n-4A0A075B615 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4n-4A0A075B615 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.07■□□□□ 0
Trav4n-4A0A075B615 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav4n-4A0A075B615 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4n-4A0A075B615 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4n-4A0A075B615 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav4n-4A0A075B615 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4n-4A0A075B615 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4n-4A0A075B615 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4n-4A0A075B615 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4n-4A0A075B615 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4n-4A0A075B615 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4n-4A0A075B615 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4n-4A0A075B615 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav4n-4A0A075B615 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav4n-4A0A075B615 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav4n-4A0A075B615 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav4n-4A0A075B615 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4n-4A0A075B615 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav4n-4A0A075B615 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav4n-4A0A075B615 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.05■□□□□ -0
Trav4n-4A0A075B615 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4n-4A0A075B615 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4n-4A0A075B615 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4n-4A0A075B615 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms