Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trav5-1A0A075B5Z7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav5-1A0A075B5Z7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav5-1A0A075B5Z7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav5-1A0A075B5Z7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Trav5-1A0A075B5Z7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav5-1A0A075B5Z7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav5-1A0A075B5Z7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trav5-1A0A075B5Z7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav5-1A0A075B5Z7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Trav5-1A0A075B5Z7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav5-1A0A075B5Z7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav5-1A0A075B5Z7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav5-1A0A075B5Z7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav5-1A0A075B5Z7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav5-1A0A075B5Z7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav5-1A0A075B5Z7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav5-1A0A075B5Z7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav5-1A0A075B5Z7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav5-1A0A075B5Z7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav5-1A0A075B5Z7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav5-1A0A075B5Z7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav5-1A0A075B5Z7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav5-1A0A075B5Z7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav5-1A0A075B5Z7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav5-1A0A075B5Z7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav5-1A0A075B5Z7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav5-1A0A075B5Z7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav5-1A0A075B5Z7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav5-1A0A075B5Z7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trav5-1A0A075B5Z7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav5-1A0A075B5Z7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav5-1A0A075B5Z7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav5-1A0A075B5Z7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav5-1A0A075B5Z7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav5-1A0A075B5Z7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav5-1A0A075B5Z7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav5-1A0A075B5Z7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.72■□□□□ 0.59
Trav5-1A0A075B5Z7 Gm13238-201ENSMUST00000117655 780 ntBASIC18.72■□□□□ 0.59
Trav5-1A0A075B5Z7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav5-1A0A075B5Z7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav5-1A0A075B5Z7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.71■□□□□ 0.59
Trav5-1A0A075B5Z7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.71■□□□□ 0.59
Trav5-1A0A075B5Z7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav5-1A0A075B5Z7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav5-1A0A075B5Z7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav5-1A0A075B5Z7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav5-1A0A075B5Z7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav5-1A0A075B5Z7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav5-1A0A075B5Z7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 Gm15546-201ENSMUST00000122095 826 ntBASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav5-1A0A075B5Z7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav5-1A0A075B5Z7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav5-1A0A075B5Z7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav5-1A0A075B5Z7 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.68■□□□□ 0.58
Trav5-1A0A075B5Z7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav5-1A0A075B5Z7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav5-1A0A075B5Z7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav5-1A0A075B5Z7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trav5-1A0A075B5Z7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Trav5-1A0A075B5Z7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav5-1A0A075B5Z7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
Trav5-1A0A075B5Z7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav5-1A0A075B5Z7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav5-1A0A075B5Z7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav5-1A0A075B5Z7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav5-1A0A075B5Z7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav5-1A0A075B5Z7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav5-1A0A075B5Z7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Trav5-1A0A075B5Z7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav5-1A0A075B5Z7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Trav5-1A0A075B5Z7 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.64■□□□□ 0.57
Trav5-1A0A075B5Z7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav5-1A0A075B5Z7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.64■□□□□ 0.57
Trav5-1A0A075B5Z7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav5-1A0A075B5Z7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav5-1A0A075B5Z7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trav5-1A0A075B5Z7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav5-1A0A075B5Z7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav5-1A0A075B5Z7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.63■□□□□ 0.57
Trav5-1A0A075B5Z7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav5-1A0A075B5Z7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav5-1A0A075B5Z7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms