Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm9824-201ENSMUST00000178707 561 ntBASIC13.64□□□□□ -0.23
Cdh17Q9R100 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Gm44771-201ENSMUST00000206975 626 ntBASIC13.64□□□□□ -0.23
Cdh17Q9R100 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.63□□□□□ -0.23
Cdh17Q9R100 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.63□□□□□ -0.23
Cdh17Q9R100 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.63□□□□□ -0.23
Cdh17Q9R100 Gm29541-201ENSMUST00000191351 678 ntBASIC13.63□□□□□ -0.23
Cdh17Q9R100 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdh17Q9R100 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.63□□□□□ -0.23
Cdh17Q9R100 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh17Q9R100 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.62□□□□□ -0.23
Cdh17Q9R100 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Gm9719-201ENSMUST00000162765 543 ntBASIC13.62□□□□□ -0.23
Cdh17Q9R100 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Mir6990-201ENSMUST00000183724 91 ntBASIC13.62□□□□□ -0.23
Cdh17Q9R100 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Gm18766-201ENSMUST00000189811 808 ntBASIC13.62□□□□□ -0.23
Cdh17Q9R100 Gm18027-201ENSMUST00000218947 619 ntBASIC13.62□□□□□ -0.23
Cdh17Q9R100 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms