Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Gm12585-201ENSMUST00000117307 290 ntBASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Gm29741-201ENSMUST00000192667 421 ntBASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Mir497b-201ENSMUST00000093601 125 ntBASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ldb3Q9JKS4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Gm15487-201ENSMUST00000122373 465 ntBASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Gm10766-202ENSMUST00000194123 606 ntBASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb3Q9JKS4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb3Q9JKS4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms